Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00843 ATGAAAGAAAGTAACGGTAAGAACACTATCGAAAAATCAGATCAAGATCAAGATCTAGGGTTGTACTTCTTGGAATTATGTAGTAGAAAAGTGAAAGAAGAGTTACAAGATTACAAcggtgatggtgatgatgaagagAAAGAGGAATCACCGAGCGAGCTTAATACTATAAATAGTTCAGgtggttttgttgttgttgctacGGATAAACTTTCAGTGAAGTATACAAGTGTTAATCTTCATGGTCATGATGTTGGTGTTATTCAAGCTAATAAATTTGCTCCGATGAAAAGACTTGTTtattattttgagatttttgttAAAGATGCTGGTGTTAAAGGTCAAGTTTCTATTGGGTTTACGTCTGAGAATTTCAAAATGAGGAGACAACCTGGGTGGGAGGCTAATAGCTGTGGATATCATGGGGATGATGGTTTCCTTTATCGTGGACATGGCAAAGGGGAAGCTTTTGGTCCAACCTATACCACTGGTGATATAGTTGGTGCTGGAATTAACTATGCttctcaagaattttttttcacTAAAAATGGACAAGTTGTTGGCACAGTTTACAAAGACATGCAGGGTCCCCTTTATCCAACTGTTGCTGTTCATAGCCAGAATGAAGAGGTACATGTCAACTTCGGGCAGAAACCATTTACCTTTGACCTAAAGGAATTTGAagcacaagaaagaatgaagcAGCAAGTGAAAATAGAGGAAATACCTGTGCCAACAAATGCAAGTTATGGAATTGTCCGTTCCTACCTGCTACACTATGGATATGAAGATACATTGAATGCATTTGATGTGGCTAGTAAGAGTACAGTTCCTCCTATAAATATAGTGCAAGAAAATGGTATTGATGACCAGGAAACAACATATGCATTGAATCACAGAAAGACTCTACGGCAGCTAATCAGGGATGGGGAGATTGATGCTGCATTTGGCAAATTGCGTGAATGGTATCCCCAGATTGCTGAGGACAATACATCAGCTATGTGTTTTCTGCTTCATTGCCAAAAATTCATTGAACTAGTTCGgGTTGGAGAACTGAAGGAGGCTGTCACATATGGAAGAATTGAATTGTCACGGTTTTTTGGGTCGCCAGTCTTTGAGGAGTTAGTTCAGGAGTGCGTTGCTTTGCTGGCCTACGAACGACCATTAGAATCTGCCGTAGGTTATCTCCTAAAAGACTCGCGACGTGATGTTGTAGCAGACTCGGTAAATGCAATGATATTGTCTACAAATCCCAACCTGAAAGAAACGAAAAATTGCTTGCACTCCAATCTTGAGAGGTTACTAAGACAGCTCACTGCGTGTTGCTATGAGAGACGATCATTGAGTGGTGATCAGGGAGAAGCTTTTCAACTTCAAAGAGTGCTTAGCAGTGGTAAAAAGAGCTAA 1407 0.3731 MKESNGKNTIEKSDQDQDLGLYFLELCSRKVKEELQDYNGDGDDEEKEESPSELNTINSSGGFVVVATDKLSVKYTSVNLHGHDVGVIQANKFAPMKRLVYYFEIFVKDAGVKGQVSIGFTSENFKMRRQPGWEANSCGYHGDDGFLYRGHGKGEAFGPTYTTGDIVGAGINYASQEFFFTKNGQVVGTVYKDMQGPLYPTVAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQVKIEEIPVPTNASYGIVRSYLLHYGYEDTLNAFDVASKSTVPPINIVQENGIDDQETTYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIAEDNTSAMCFLLHCQKFIELVRVGELKEAVTYGRIELSRFFGSPVFEELVQECVALLAYERPLESAVGYLLKDSRRDVVADSVNAMILSTNPNLKETKNCLHSNLERLLRQLTACCYERRSLSGDQGEAFQLQRVLSSGKKS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00843 468 SUPERFAMILY Concanavalin A-like lectins/glucanases 58 222 IPR013320 -
Tsu06g00843 468 SMART SPRY_3 98 219 IPR003877 GO:0005515
Tsu06g00843 468 MobiDBLite consensus disorder prediction 35 56 - -
Tsu06g00843 468 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 296 354 IPR006595 -
Tsu06g00843 468 Pfam CTLH/CRA C-terminal to LisH motif domain 298 441 IPR024964 -
Tsu06g00843 468 PANTHER RAN BINDING PROTEIN 9-RELATED 39 466 - -
Tsu06g00843 468 PANTHER RAN-BINDING PROTEIN M HOMOLOG 39 466 - -
Tsu06g00843 468 Pfam SPRY domain 101 217 IPR003877 GO:0005515
Tsu06g00843 468 ProSiteProfiles B30.2/SPRY domain profile. 32 220 IPR001870 -
Tsu06g00843 468 SMART toby_final6 350 451 IPR013144 -
Tsu06g00843 468 Gene3D - 28 236 IPR043136 -
Tsu06g00843 468 CDD SPRY_RanBP_like 86 216 IPR044736 -
Tsu06g00843 468 SMART ctlh 296 354 IPR006595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00843 K23334 - gmx:100805319 773.467