Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00835 ATGATAACGAGCTGCGTTGGTTGGgcaccaccatcatcatcatcaccaccgTCAATCTGTTGCGGCGAGACTAAGCTACTACGGCGGCAACACCAATCTCCATCTGCATCTTCACTTTCGTTTTCACGTTCATTTCCTTCTTTACCcatctcaacaacaacaataaccaCTCTCTCTCCCACCAATCCCAAAGGTTCTGTCATTCGAGCTGCTTGGACCCGAAGATCTCGAGGTGAAGCTGCAAAGAGACCCAGCAGGAAATCATGGAAGCGGAGAACAGATATGTACATGAGACCATTCTTATTAgacattttcttttcaaagaaattcattcacgccaaATTGACGCACCGTGGAACAAGTAAAGTGATATGTGCTGCTACCACAAATGCCAAGGATCTTCGAAACTCTCTTCCGTCCTTGATAGATCCTGACGCTTGTAGAATAATTGGAAAGCTTATAGCAGAGCGATCAAAGGAAGCTGATGTATATGCCATGGCATACGAACCGAGAAAGAACGAAAGGATTGAAGGTGAAAATGATGATGTTGATaataagaacaagaagaaaaacaagaaaagggGTCAAGAATCTGTTAAAGacgaggatgatgatgatgatggtagtGGTACTGCTTTGAAAGGAACAATTTTGGCTGGTGTTTTACTTGTTGGTTTTGTTGGGGGTTTTGCTTCTGTTGGCTATTTTTATAGAGAGCCTATTAATTCTTTCTTGAATCAATTCTCTGGTTTCATTGAAgGTTATGGTTCAGCTGGATACGCATTGTTTGTTGCCGTTTATGCTGGATTGGAGATCCTTGCAATTCCTGCCGTTCCCTTAACCATGTCAGCTGGACTTCTTTTTGGATCCCTTACTGGCACTATCATAGTCTCTATCAGTGGAACAGTAGCGGCCAGTGTTGCTTTTCTAATCGCGAGATATTTTGCTCGTGAGCGTATTCTAAAACTAGTTGAAGGAAATAAGAAGTTTCTTGCTATTGACAAAGCAATTGGAGAAAATGGTTTCAAGGTTGTGACCCTGCTTCGTTTGAGTCCTTTGCTGCCATTTTCTTTGGGGAATTATTTATATGGATTGACATCTGTTAAGTTTCTTCCGTATGTATTGGGAAGTTGGTTGGGGATGCTTCCAGGAACATGGGCTTATGTTAGTGCCGGTGCTTTTGGAAGAGCAATAATTGTGTTTTCTGTCAAAGCTTCTTTGGCTGGATTAGACTATAGAAGGTCGGAGGGGCACAAGGTTGATGAGTTAGTCTGGAAAGGGGGTGCAGGTGACATTTTCTGTAGATGTGTTGTGGCTGTAAGAGGAGTTCCACACTCTCTTGCACACTGGATATACCGTATCTGA 1365 0.3853 MITSCVGWAPPSSSSPPSICCGETKLLRRQHQSPSASSLSFSRSFPSLPISTTTITTLSPTNPKGSVIRAAWTRRSRGEAAKRPSRKSWKRRTDMYMRPFLLDIFFSKKFIHAKLTHRGTSKVICAATTNAKDLRNSLPSLIDPDACRIIGKLIAERSKEADVYAMAYEPRKNERIEGENDDVDNKNKKKNKKRGQESVKDEDDDDDGSGTALKGTILAGVLLVGFVGGFASVGYFYREPINSFLNQFSGFIEGYGSAGYALFVAVYAGLEILAIPAVPLTMSAGLLFGSLTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIVFSVKASLAGLDYRRSEGHKVDELVWKGGAGDIFCRCVVAVRGVPHSLAHWIYRI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00835 454 MobiDBLite consensus disorder prediction 175 200 - -
Tsu06g00835 454 Pfam SNARE associated Golgi protein 275 393 IPR032816 -
Tsu06g00835 454 SUPERFAMILY Translational machinery components 83 168 - -
Tsu06g00835 454 Gene3D Ribosomal protein S11 56 192 IPR036967 GO:0003735|GO:0005840|GO:0006412
Tsu06g00835 454 MobiDBLite consensus disorder prediction 175 208 - -
Tsu06g00835 454 CDD Ribosomal_L18_L5e 89 161 - -
Tsu06g00835 454 PANTHER - 173 408 - -
Tsu06g00835 454 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00835 Tsu-Chr6 7480911 7489216 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00835 - - nta:107794338 330.487