Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00829 atgGGTAGAAGTTCTGTTCTTGCTGTTGATGATTGGGAGTTTGCTTCCTCACCTAATGATGTTAAGACACTTGTTTTATTCGGACGTACCGGCAATGGCAAGAGTGCAACTGGTAATAGTATTCTTGGAAGAAAGGCCTTTCTATCAAGGGCCTGCTCTTCCGGCATAACATCCTCTTGTGAAATGCAAACAACTACGATGGATGATGGACAAACTGTTAATGTTATCGATAGTCCAGggttatttgatttttctttcgGATCTGATTTAATCGGCAAAGAAATAGTCAAGTGCATTGGTTTGGCCAGAGACGGGATCCATGCCATCCTCGTAGTGTTCTCTGTTAGAACACGCTTTAGTGCGGAAGAAGAAAGTGCTTTGCGTGCCTTACAAAAAATATTCGGAAGCAAAATTGTTGACTACATGATTGTGGTCTTTACCAGAGGAGACGAGTTGGAAGAAAATAACGAGACACTAGACGATTATTTAGGCCGTGAATGTCCAGAGCCTTTAAAAGCAATTCTTTCTTTATGTGGGAATCGATACGTGCTTTTTGACAACAAAACCAAGGATGAAAAGAAGCGACAAAAACAAGTTCAACGACTTCTCTTTATCGTAGATATTGTAATATCAAAGAATGGTGGACGACCTTTTACAGACAagttatttaaagaaataaagAAAAGAGAAATGGAGATGCAGAAACAACAAAGAGAGGTTGATTCCATGCAAGGACATTCAAAAGAAGATATATTAGGGTTTAAAAAGCAAATGGAGCAAGATTACAATGACCAGCTTAATCAAATTACTCAGATGGTAGAGTCAAAGTTGAGGGAAGCAACTACAAAGCTAGAGGAACAATTGGCAAAAGAGCAAGCTGCAAGACAAGCGGCGGAAGAGTATGCAAATGCTGCTCAAATGAAATCAAACAATGAAATTAGGAAACTTAGAAGACATCTTGAGCGAGCACACGAAGAACTTCGTCAACAAAGTCAAGATTCACCATTTAAGAAACTAAGAAGACATTTTGATCAGGCACATGAAGAAGTTCGTAGGCGAACTCCAAATGATAGTTGTACCATTCTATGA 1089 0.3811 MGRSSVLAVDDWEFASSPNDVKTLVLFGRTGNGKSATGNSILGRKAFLSRACSSGITSSCEMQTTTMDDGQTVNVIDSPGLFDFSFGSDLIGKEIVKCIGLARDGIHAILVVFSVRTRFSAEEESALRALQKIFGSKIVDYMIVVFTRGDELEENNETLDDYLGRECPEPLKAILSLCGNRYVLFDNKTKDEKKRQKQVQRLLFIVDIVISKNGGRPFTDKLFKEIKKREMEMQKQQREVDSMQGHSKEDILGFKKQMEQDYNDQLNQITQMVESKLREATTKLEEQLAKEQAARQAAEEYANAAQMKSNNEIRKLRRHLERAHEELRQQSQDSPFKKLRRHFDQAHEEVRRRTPNDSCTIL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00829 362 Pfam AIG1 family 23 237 IPR006703 GO:0005525
Tsu06g00829 362 ProSiteProfiles AIG1-type G domain profile. 19 227 IPR006703 GO:0005525
Tsu06g00829 362 Coils Coil 306 333 - -
Tsu06g00829 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 195 IPR027417 -
Tsu06g00829 362 Coils Coil 277 304 - -
Tsu06g00829 362 CDD AIG1 22 228 - -
Tsu06g00829 362 Coils Coil 219 239 - -
Tsu06g00829 362 Gene3D - 22 251 IPR027417 -
Tsu06g00829 362 PANTHER BNAC06G07830D PROTEIN 9 329 - -
Tsu06g00829 362 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 9 329 IPR045058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00829 Tsu-Chr6 7421812 7429539 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00829 - - gmx:100807910 422.935