Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00823 ATGACAGAACTTGAAACCATTGCTATTGAAAAAGCAAAGCGAGTACAAGTTCCTTTCCCAAATGGAACAACAAGTTTAAATCCACCAATTGATATGagtaaaagaagaagaggaagtgATGGACCTTTAGCAAAGGCATTTAATAACGAAGCAAGAGACCATCTATCAGCTGAAATAGCTAGGCTATTTTATACTGCTGGGCTGcccttcaatgttgccaaaaaTCCTCACTTTATCAGTGCATTTACTTATGCAGCAAATGCTTCTATCTCAGGTTATGTTCCTCCTAACTATAATTTCATAAGAACAACCATGTTTCAAAGAGAGAAGAACAATGTAGAGAAACTACTGCAGCCTATCAAAGGCACTTGGTATGAAAAAGGTGTCAGCATAGTTTCGGATGGTTGGATAGATGCCCAAAAAAGACCATTGATTAACTTTATGGCAATTTCGAATGCGACACCTATGTTTTTGAATGCTATTGATGGAACAACAGAGTTCAAAGACAAACATTATATTGCAAAACTAATTTTGGAAACAATTAGTGTTGTGGGAGCACAAAATGTTGTCCAAATCATTACTGATAATGCTCTTGTTTGCAAAGCTGCTGGTTCAATTGTTGAAGGTACGTATCCTCATATTTTTTGGTTACCGTGTGTAGTGCACACATTGAATTTGGCTCTAAGAAATATATGTGCACCAAAACCAGATCATGAAGATGTTTATAGTGAATGTAATTGGATAGCTCTTACTGCTGCTGATGCTAAATTTATTATGAACCATTCCATGAGATTTGCTATGTTCAAAAAATTTGtggatttgttttttctttctatttctgAAACAAGATTTGCTTCAGTTATTGTTATGCTTAAGAGGTTTAAGAACATTAAGAAAGAGCCTATCTATGACATGCTTCGTTCTTGTGATACTAATGAGTCAAATCTTCATTTGGTTTATGAGAAGTGGGATTCTATGATTGAACAAGTCAAGTTAGCAATATATAAACATGAGAACAAAGAGTTGGCCCAGTATTCATCCTTTTATGATATTGTTTATAACATCCTAATTGATAGATGGACTAAAAgtcatacacctcttcattgcTTGGCTCATTCTCTCAATCCAAGACAGTGGTTAGATCAATCCCCAAACCGAGTTGCGCCGCATAGAGACAATGAAATTTGCACAGAAAGAAAACATTGCTTAAGGAATTACTTTGCAGATGCACATGAAAGGCTAGAGGCTACTACAGAATTTGTTAAGTTCTCAAGTGCGGAAGGAGAGCTTGGCCAATTTGATTCATTGCAAGATAGGTGGAACTTGACACCAAAAGAATGGTGGATCACTTATGGATCCTCAGTCCCTAAACTTCAATCTATTGCATTGAAGCTCCTTTCACAACCAATTTTCGTGTTGCTTGGGTTTTGTTTTCTTCACTCTTTCACTTCTTCCTTGCTTCGTTCCGAAAACGCTTTCTCCTTTCACAGTGAATTGAGTTTACGATGGGGGGAAGTTATGTTGACGATGATTGGGAATTTGCGTCATCCTCATCGACAGCTAGTCTTTAAGTCAAGGGCTAGCTCGTCTGGTGTTACCGCCTCTTGTGAAATGCAGACAGCTGAGTTGAATAATGGTGGACTGATTGTCAATGTTATTGACACTCCAGGGTTGTTTGAAGTTTCTAATGGATCTGAGTTTGTTGGGAAAGAAATAGCCAAGTGCATTGGCTTTGCTAAGGATGGTATCCATGCAATCCTTGTAGTGTTATCTGTTAGATCACGATTTAGTGAGGAAGAAGAAAATGCTCTACGTAGCTTGCGAACATTATTTGGAAGCAAAATTGTTGACTACATGATTGTGGTATTCACGGGAGGAGATGATTTAGAAGATAATGATGAGACACTGGACGATTATTTAGGCCGTGAATGTCCAGAGAcattaaagGAAATCCTTACTTTGTGTGGGAATCGTCGTGTTCTCTTTAACAACAAGACAAAGGATGAAGAGAAGCAATCTGAGCAAGTTCAACAACTTCTCTCTTTTGTAAACACGGTGGTATCAAACAATGATGGGCGGCCCTTTACCGATGAATTATTTACAGAACTAAAGAAAGGAGCAATGAAACTGCATAGTGAGCAGAGGAAGTTTGATTCAATGGAAGGATGCTCAGAAGGACAAATATCGGAGTTTAAAAAGCATATGCAACAAGCATATGATGATCAGCTAAAACAAATTACTGAGATGATTGAGTCAAAGTTGAAGGAGGCAACTACAAGGCTTGAGAAACAATTGGCAGAAGAGCACACTGCAAGACTAAAAGCAGAAGCCAGTGCAAAGATAGCTCAAAAGAAATCAGACGAAGAAATACGAAAACTAAGAGAGCATCTTGATAAGGCTCATGAAGAACTCCGCAGCCGAGGTGGCGGATGTACCATTCTGTGA 2445 0.3685 MTELETIAIEKAKRVQVPFPNGTTSLNPPIDMSKRRRGSDGPLAKAFNNEARDHLSAEIARLFYTAGLPFNVAKNPHFISAFTYAANASISGYVPPNYNFIRTTMFQREKNNVEKLLQPIKGTWYEKGVSIVSDGWIDAQKRPLINFMAISNATPMFLNAIDGTTEFKDKHYIAKLILETISVVGAQNVVQIITDNALVCKAAGSIVEGTYPHIFWLPCVVHTLNLALRNICAPKPDHEDVYSECNWIALTAADAKFIMNHSMRFAMFKKFVDLFFLSISETRFASVIVMLKRFKNIKKEPIYDMLRSCDTNESNLHLVYEKWDSMIEQVKLAIYKHENKELAQYSSFYDIVYNILIDRWTKSHTPLHCLAHSLNPRQWLDQSPNRVAPHRDNEICTERKHCLRNYFADAHERLEATTEFVKFSSAEGELGQFDSLQDRWNLTPKEWWITYGSSVPKLQSIALKLLSQPIFVLLGFCFLHSFTSSLLRSENAFSFHSELSLRWGEVMLTMIGNLRHPHRQLVFKSRASSSGVTASCEMQTAELNNGGLIVNVIDTPGLFEVSNGSEFVGKEIAKCIGFAKDGIHAILVVLSVRSRFSEEEENALRSLRTLFGSKIVDYMIVVFTGGDDLEDNDETLDDYLGRECPETLKEILTLCGNRRVLFNNKTKDEEKQSEQVQQLLSFVNTVVSNNDGRPFTDELFTELKKGAMKLHSEQRKFDSMEGCSEGQISEFKKHMQQAYDDQLKQITEMIESKLKEATTRLEKQLAEEHTARLKAEASAKIAQKKSDEEIRKLREHLDKAHEELRSRGGGCTIL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00823 814 CDD AIG1 519 705 - -
Tsu06g00823 814 PANTHER OSJNBA0013A04.12 PROTEIN 300 472 - -
Tsu06g00823 814 PANTHER OSJNBA0013A04.12 PROTEIN 34 299 - -
Tsu06g00823 814 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 300 472 - -
Tsu06g00823 814 Pfam Protein of unknown function (DUF 659) 96 256 IPR007021 -
Tsu06g00823 814 ProSiteProfiles AIG1-type G domain profile. 498 704 IPR006703 GO:0005525
Tsu06g00823 814 PANTHER HAT TRANSPOSON SUPERFAMILY PROTEIN 34 299 - -
Tsu06g00823 814 SUPERFAMILY Ribonuclease H-like 126 470 IPR012337 -
Tsu06g00823 814 Gene3D - 507 714 IPR027417 -
Tsu06g00823 814 Coils Coil 747 767 - -
Tsu06g00823 814 MobiDBLite consensus disorder prediction 18 39 - -
Tsu06g00823 814 Coils Coil 783 803 - -
Tsu06g00823 814 Pfam AIG1 family 520 712 IPR006703 GO:0005525
Tsu06g00823 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 532 669 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00823 Tsu-Chr6 7396023 7405046 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00823 - - aprc:113851164 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00823 06 7396023 7405046 Tsu06g00823 06 7396023 7405046 ECH