Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00799 ATGGCGGCGATCGAAGAATTATCCGAACTCGCTGATTCCATGCGTCAAGCTTCTGCGTTACTCGCCGACGAAGATATTGACGAAACTTCCAATTCTAGAAGACCTTCAACTTTCCTCAACGTTGTTGCTCTCGGCAACATCGGTTCTGGTAAATCAGCGGTGTTGAACAGTTTAATTGGACATCCAGTTCTGCCTACTGGTGAAAATGGAGCTACTAGAGCTCCAATTTGTATTGATCTGCAACGAGACACTTCATTGAGCAGCAAATCTATAATATTGCAGATTGATAATAAATCTCAGCAAGTTTCAGCAAGTGCTTTAAGACATTCCTTGCAGGATAGGTTGAGTAAGGCTACAACATCCAAGGCTCGCGAtcaaataactttgaagctacGCACGAGTACAGCTCCACCTCTGAAGTTGATTGATTTACCCGGGTTGGATCAGCGCAccttggatggatcaacaGTTAGTGATTATGCGGAGCATAATGATGCCATCCTGGTAGTTATTGTACCTGCAGCTCAAGCACCTGACATTGCTTCCTCTCGAGCCCTAAGAATGGCAAAGGAATACGATTCAGAAGGTACCAGAACTGTTGGTGTTATCAGTAAAATAGATCAAGCTGCATCAGACCCAAAAGCAATAGCTGCAGTTCAAGCACTTCTACTGAATAAGGGACCTTCAAGAGCATCAGATATGCCTTGGGTTGCATTAATCGGTCAATCAGTCGCAATAGCTACGGCACAGTCTGGATCTGCTGGTTCTGAAAGTTCTTTAGAAACTGCATGGAAAGCAGAGAGCGAAAGCCTCAAGTCCATACTGACAGGAGCCCCTCAAAGCAAGCTTGGAAGGATAGCTTTGGTGGATGCTTTGGCACAGCAGATTCAGAATCGCATGAGGCTGCGGGTGCCTAACCTTCTTTCTGGGTTACAAGGGAAGTCTCAGGTAGTTCAGGATGAATTGGCGAGGCTTGGTGAGTCAATGGTCACCACTGCTGAGGGTACTCGTGCTATAGCCTTGGAACTCTGCCGTGAGTTTGAAGATAAGTTCCTACAGCACATTACCACTGGCGAGGGAACTGGTTGGAAAATTGTTGCCTGCTTTGAGGGGAGATTTCCTGATAGAATGAAGCAACTACCATTAGATAGGCATTTTGATATCAACAATGTAAAGAGGATTGTGTTAGAAGCTGATGGTTATCAGCCATATCTCATTTCCCCTGAAAAAGGATTAAGATCATTAATCAAAGGTGTTCTAGAGCTTGCGAAAGAGCCATCACGTCTTTGTGTTGAGGAGGTACACCGTGTCCTGATGGATATTGTATCGGCTGCTGCCAATGCTACACCTGGTTTAGGAAGATACCCACCTTTCAAAAGAGAGcTTGTGGCTCTTGCAACTGCTGCACTAGAAGGGTTTAAGAACGAATCAAAGAAAATGGTGGTTGCACTAGTTGATATGGAGCGTGCTTTTGTGCCACCCCAACACTTCATTCGCTTGGTACAAAGGAGGATGGAAAGGCAACGCCGAGAAGATGAGTTGAAGGGCCGATCTTCGAAAAAAGGGCACGATGCAGAGCAATCTATACTTAATCGGGCCACTAGTCCCCAAACCGGTGGAAGCATGAAATCACTAAAGGAAGATAAGGATAAGGAAAAGGACAAATCTGGCCAGGCAGATAAAGAAGGGCAAGAAGGCTCTGGTTTAAAGACTGCTGGTCCTGAAGGAGAAATCACAGCAGgatttttgttgaagaaaagtGCAAAAACTAATGGTTGGAGCAGGCGATGGTTTGTGCTAAATGGAAAGACAGGAAAGCTTGGGTACACAAAAAAACAAGAGGAAAGACATTTTCGTGGTGTTATTACATTAGAGGAGTGTAACATTGAAGAGGTTCCAGAAGAAAATGACCCTCCGCCAAAAAGCTCAAAGGACAAGAAGTCCAACGGACCGGATTCTAGCAAAGTCAACCTTGTATTTAAAATTACTAGTAGAGTCCCGTATAAAACTGTTTTGAAAGcaCACAGTGCTGTTGTTTTGAAGGCTGAGAGTGCAACTGATAAGACTGAATGGATTAATAAGATAAGTAGCGTTATACAAGCAAAAGGAGGGCAAATAAGGATTTCATCTGAGGGTGGCTCTGCCATGAGGCATAGCCTCTCCGACGGTTCTTTGGATACAATGGCTCGAAGACCTGCTGATCCTGAGGAAGAACTCCGATGGATGTCCCAAGAAGTCCGTGGCTATGTTGAAGCAGTTTTAAACAGTTTAGCTGCTAACGTACCAAAGGCAGTTGTCCTTTGCCAAGTTGAAAAAGCTAAGGAAGACATGCTGAATCAATTATATAGCTCTGTCAGTGGTCATAGCACGGCTAAGATTGAGGAGTTGCTTCTAGAAGATCAAAATGTAAAGCGGAGGAGAGAGCGTTACCAGAAGCAGTCCTCGCTTCTCTCCAAACTGACCCGCCAACTGAGTATACATGACAACCGTGCAGCTGCTGCCTCAAATTGGTCAAATGGGGGTGCAGAGAGTAGCCCAAGAAGCAGCGGACCAGGTGATGACTGGAGATCTGCCTTTGATGCAGCTAGCAATGGCTCGGTTAGCCGTAGTGGTTCATCGAGATCTGGTTCAAACGGTCATAGTCGGCATAATAGTGATCCTGCACAAAATGGTGACCTGAACTCTGGTCCAAACTCTGGCAGCCGTCGTACTCCTAACCGGTTACCACCTGCTCCACCAGGTTCTTCGGGTTACAAATATTAA 2763 0.4459 MAAIEELSELADSMRQASALLADEDIDETSNSRRPSTFLNVVALGNIGSGKSAVLNSLIGHPVLPTGENGATRAPICIDLQRDTSLSSKSIILQIDNKSQQVSASALRHSLQDRLSKATTSKARDQITLKLRTSTAPPLKLIDLPGLDQRTLDGSTVSDYAEHNDAILVVIVPAAQAPDIASSRALRMAKEYDSEGTRTVGVISKIDQAASDPKAIAAVQALLLNKGPSRASDMPWVALIGQSVAIATAQSGSAGSESSLETAWKAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMRLRVPNLLSGLQGKSQVVQDELARLGESMVTTAEGTRAIALELCREFEDKFLQHITTGEGTGWKIVACFEGRFPDRMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVEEVHRVLMDIVSAAANATPGLGRYPPFKRELVALATAALEGFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKGRSSKKGHDAEQSILNRATSPQTGGSMKSLKEDKDKEKDKSGQADKEGQEGSGLKTAGPEGEITAGFLLKKSAKTNGWSRRWFVLNGKTGKLGYTKKQEERHFRGVITLEECNIEEVPEENDPPPKSSKDKKSNGPDSSKVNLVFKITSRVPYKTVLKAHSAVVLKAESATDKTEWINKISSVIQAKGGQIRISSEGGSAMRHSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSGHSTAKIEELLLEDQNVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASNWSNGGAESSPRSSGPGDDWRSAFDAASNGSVSRSGSSRSGSNGHSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGSSGYKY 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00799 920 Coils Coil 793 813 - -
Tsu06g00799 920 PANTHER DYNAMIN-2A 2 851 - -
Tsu06g00799 920 PANTHER DYNAMIN 2 851 IPR022812 -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 503 527 - -
Tsu06g00799 920 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Tsu06g00799 920 ProSiteProfiles GED domain profile. 739 832 IPR020850 -
Tsu06g00799 920 Pfam Dynamin central region 259 496 IPR000375 -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 634 651 - -
Tsu06g00799 920 SMART dynamin_3 4 247 IPR001401 GO:0003924|GO:0005525
Tsu06g00799 920 PRINTS Dynamin signature 38 56 IPR022812 -
Tsu06g00799 920 PRINTS Dynamin signature 63 80 IPR022812 -
Tsu06g00799 920 PRINTS Dynamin signature 175 193 IPR022812 -
Tsu06g00799 920 PRINTS Dynamin signature 194 210 IPR022812 -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 528 542 - -
Tsu06g00799 920 Pfam Dynamin GTPase effector domain 737 819 IPR003130 GO:0003924|GO:0005525
Tsu06g00799 920 MobiDBLite consensus disorder prediction 629 654 - -
Tsu06g00799 920 SUPERFAMILY PH domain-like 577 722 - -
Tsu06g00799 920 Pfam Dynamin family 41 205 IPR045063 -
Tsu06g00799 920 Gene3D - 37 320 IPR027417 -
Tsu06g00799 920 CDD DLP_1 41 305 IPR001401 GO:0003924|GO:0005525
Tsu06g00799 920 MobiDBLite consensus disorder prediction 831 920 - -
Tsu06g00799 920 Gene3D Dynamin, middle domain 332 562 - -
Tsu06g00799 920 Pfam PH domain 581 699 IPR001849 -
Tsu06g00799 920 ProSiteProfiles PH domain profile. 576 700 IPR001849 -
Tsu06g00799 920 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 305 IPR030381 GO:0005525
Tsu06g00799 920 MobiDBLite consensus disorder prediction 861 905 - -
Tsu06g00799 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 314 IPR027417 -
Tsu06g00799 920 SMART PH_update 577 702 IPR001849 -
Tsu06g00799 920 Coils Coil 542 562 - -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 503 575 - -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 543 561 - -
Tsu06g00799 920 Gene3D - 567 703 IPR011993 -
Tsu06g00799 920 MobiDBLite consensus disorder prediction 831 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00799 Tsu-Chr6 7142220 7154998 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00799 K01528 - gmx:100798346 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00799 06 7142220 7154998 Tsu06g00799 06 7142220 7154998 ECH