Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00795 atGGCATCTATTGAGGAGCTATCCAATCCAACACTCAAATCCATGGATGATATCAAAGCTAAAGATGATGAAAAACTGATTCCATCAGATGAAATGATAGAGAGGAGTTTAGGAACATTTGGATGGGTAGAATTTGTGCAATGCATTCTCGTATCGTTTGCAATGTTCTTCGATGCACAACAATCGTTCATAACAATCTACACCGACGATTATCCAACATGGCATTGCACAAATCAAACTATGTGCACATCAAATTCCAACATCTGCAAAATCCCCAAATCTTCATGGTCATGGGATGGACCATCAGAAAAAACAATCATATCTCAATGGAATCTTGAATGTGCAAGTAGCTTCATCACAGGTTTACCACAATCTTCATTCTTCATTGGTTGTCTTATTGGTACTTTTGCTTTAGCAACTTTGGCTGATACAtcatttggaagaaaaaacatgttAATTTTCTCTTGTTTATCAATGTCAATAACCTCAATCATCATAGTATTTTCGCCCAACGTTTGGATTTACTCAGCTTTAAAGTTTCTGATCGGATTCTGGCGTTCGTCAATTGGAACATGTGTTCTTGTTTTGTTAACGGAGAAAGTTAGCACCGAATGGAGGTTCACGGTTGGGATTGTTGAATACTTTTGTTTCACATTAGGGTACATGTCGTTACCTGGTGTAGCTTATGTTTTTCGATTTTCATCGTGGAAAAATGTTTATATTTGGACATCAATTCCGGCTATAATTTACTCAATCATTGGTTATTTCTTTGTTACCGAGTCTCCAAGGTGGCTTCTAATGCAAGGTAGAAACCAAGAAGCTATTGCAATGCTTAAAGGAATGAGTTCCGAAGAAAACGATGATTTAACCGCGAGTTTATTGCTAAATGTACCCCCTCAACAAAAGGCTTCGGTTTTTCAACTTTACTCATCAATAGCAAAGTTGTTTGAGAGAAGTTGGGCTTTGAAACGAATGGTTGCAATTATGGTGCTTGGTATTGGAATTGGAATGGTTTATTTTGGTATGCCATTAGCCGTTGGAAActtagggtttgacatttacTTAGCCGTTGTGTTCAATGCCTTAATGGAAATACCGTCTTGTGTCGCTACCTATTTCTTGGAGAATCGGCAAAGAAAGCCATCAATTCTTGCATTTTCATTAGCAAGTGGCATATCTTGTGTTATGTGCGTCGTTGTTGGATCAGGAGTACAAGGAATCAAAGTCGGGTTAGCACTAACCTCGTTTTTCAGTGCTTGTACGGCTTACAATGTATTTCTTATATACATTATAGAGCTGTTTCCGACAAGTGTGAGGAACACGACGACATCGTTGAATTTTCTAGTAATAGTTCGTATTCCTCATACATATATAAACCGAAACAAACGAAATAGACTGAAACAACAACGGAAGATGTTCAAAAAGGCGGTGGAAGCTAAGTCTCAACAGAGACTATCCGGTGCCGATAGGAAAAAGCTCAAACGAACCGTTAAAGACAAATTCCCAAGAGCTTCTGATTCTGACCTAGACACTTTACTTCCTCCTAAGGTAGAGATAACAGTGGCCAAGTTTCAAACCAGAGTTCATGTGTATGCTGTGGAGGGAGGTTTTCCTGTGTTTTTCGACATTGACGGCCGCGGTTCAGATATTTTCCCAACAGTTTATGCTCTCTGGATGGTCCCTGATTTGCTGCCAGCTTTCATACTCAAGGGCGGCGAGGTTTCTCGGTATGTTATAGGTGGAGCTGACTTGATGTTCCCTGGTATACTTGTGCCACCTGAAGGTCTTCCATCATTTGCAGCCGGGGAAACGTGGGCAGTTAAAGTACCCGAAAATCCTGCTCCCATTGCGGTTGGGAGTACCACAGTGAGCAGTGCCGAAGCATTGAAGGCTGGATTACGTGGAAAAGCATTGAGAATAACTCATTATTATCGTGATTTGCTTTGGGAATCAGTTGAAGGCCGTTATGTGCCTAATGCAGGGTTTTTGGAAGATGTTGTGTTTGGCCATCCTTCTTTATTATCACCACCTTCTCATGATTCTGATTTGACTGATGCCGCTTGTGAGACATCAATTGACCAACAGAACAACGCAAAAAGTGATGAAGCGGAGGGATTATTGGATGTAAACGAGTTACCATCTGACTCCAGCCATGCATTAACAACACCAAACAATGGTGAAATTACGGCAGATGAAATAACTGCTGGTGTGGTTGATTTGAAGTTACCTGATAGTGACTCTCCTAATGAACCAAATGACCAACATACTTTATCAACTTCAGATATAGATTTGCTGTTAGATAAGTGCCTTTTGCAAGCACTGCATACAACATTGAAGGATAAAGACCTTCCAATTCCTGGAAGCACTCTATGGTCAAACCATGTATTGCCATGTAGGCCTTCAGGAATAACTTTAGACATCAAGAAGTCGTCCCACAAGAAGCTATCTAAGTGGTTACAAGCAAAAGCTTCATCTGGCTTGATATCAGTAAAAGAAGACAAGCATAAAAAAGAAGTTGTGCTATTTTCAGTTAACCGAAAACATGCTGATTATTCATCCTTTAAGCCTGAAAAAAGGCCAGTGGAGAAACCTGACCAATCCAGTGTCCAATCTGTCAATGAAACTCGTTCGTCCAAAACTCTTGAAGTGGCTGAAATCTACAAGCCAAGTGTACATGTCAATCCCATATTTTCATCTGTAGGAGCTGATACAGGGAAACTTTATACTGCTTCTGAAGCCACTGATATTGTCTTCGCATATgttgaaaaagaaaatcttgTGAAGCCTATAAATAAATCCCTTGTGATTCTAGATGCAACGTTATGTGATGCACTGTTCAAGGGGGCTATTAAAAAAGGAACTACTTATCCTACTGAAATTCACAAGAAAGATATAGGGCAAACATTTGTGAACCGAATGCAACCTCACCATGTTGTGACAAGAGGGAATGAATCTGTAGTTCGTAAAGGTGCACttaaaacaattcaaataatGACAGAAAGGCGGCAAGGCAACAAGAAGGTAACCAAACTATCCGGTATGGAATCATTTCTTATAGATGGTGAAGCATTAGCATCAGAACTTCAGAAGAAGTTTGCTTGCAGTACCACTGTTGGAGAACTACCAGGTAAGAAAGGGCAAGAAGTTCTGGTTCAAGGTGGAGTCATTGATGACTTGGGAAGGCATTTGGTTGAACAATATGGAGTTCCAAAGAGATTTATTGAAGTTCTTGATAAAACCAAGAGATGA 3249 0.3927 MASIEELSNPTLKSMDDIKAKDDEKLIPSDEMIERSLGTFGWVEFVQCILVSFAMFFDAQQSFITIYTDDYPTWHCTNQTMCTSNSNICKIPKSSWSWDGPSEKTIISQWNLECASSFITGLPQSSFFIGCLIGTFALATLADTSFGRKNMLIFSCLSMSITSIIIVFSPNVWIYSALKFLIGFWRSSIGTCVLVLLTEKVSTEWRFTVGIVEYFCFTLGYMSLPGVAYVFRFSSWKNVYIWTSIPAIIYSIIGYFFVTESPRWLLMQGRNQEAIAMLKGMSSEENDDLTASLLLNVPPQQKASVFQLYSSIAKLFERSWALKRMVAIMVLGIGIGMVYFGMPLAVGNLGFDIYLAVVFNALMEIPSCVATYFLENRQRKPSILAFSLASGISCVMCVVVGSGVQGIKVGLALTSFFSACTAYNVFLIYIIELFPTSVRNTTTSLNFLVIVRIPHTYINRNKRNRLKQQRKMFKKAVEAKSQQRLSGADRKKLKRTVKDKFPRASDSDLDTLLPPKVEITVAKFQTRVHVYAVEGGFPVFFDIDGRGSDIFPTVYALWMVPDLLPAFILKGGEVSRYVIGGADLMFPGILVPPEGLPSFAAGETWAVKVPENPAPIAVGSTTVSSAEALKAGLRGKALRITHYYRDLLWESVEGRYVPNAGFLEDVVFGHPSLLSPPSHDSDLTDAACETSIDQQNNAKSDEAEGLLDVNELPSDSSHALTTPNNGEITADEITAGVVDLKLPDSDSPNEPNDQHTLSTSDIDLLLDKCLLQALHTTLKDKDLPIPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLQAKASSGLISVKEDKHKKEVVLFSVNRKHADYSSFKPEKRPVEKPDQSSVQSVNETRSSKTLEVAEIYKPSVHVNPIFSSVGADTGKLYTASEATDIVFAYVEKENLVKPINKSLVILDATLCDALFKGAIKKGTTYPTEIHKKDIGQTFVNRMQPHHVVTRGNESVVRKGALKTIQIMTERRQGNKKVTKLSGMESFLIDGEALASELQKKFACSTTVGELPGKKGQEVLVQGGVIDDLGRHLVEQYGVPKRFIEVLDKTKR 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00795 1082 Coils Coil 463 483 - -
Tsu06g00795 1082 Pfam Pre-PUA-like domain 473 561 IPR041366 -
Tsu06g00795 1082 MobiDBLite consensus disorder prediction 853 875 - -
Tsu06g00795 1082 ProSiteProfiles PUA domain profile. 564 645 - -
Tsu06g00795 1082 CDD eIF2D_C 995 1077 IPR039759 -
Tsu06g00795 1082 Pfam Sugar (and other) transporter 108 447 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu06g00795 1082 Gene3D - 470 656 - -
Tsu06g00795 1082 Gene3D MFS general substrate transporter like domains 46 453 IPR036259 -
Tsu06g00795 1082 CDD eIF2D_N 480 552 - -
Tsu06g00795 1082 ProSiteProfiles Translation initiation factor SUI1 family profile. 995 1067 IPR001950 GO:0003743|GO:0006413
Tsu06g00795 1082 SUPERFAMILY eIF1-like 961 1078 IPR036877 GO:0003743|GO:0006413
Tsu06g00795 1082 Pfam Translation initiation factor SUI1 993 1070 IPR001950 GO:0003743|GO:0006413
Tsu06g00795 1082 SUPERFAMILY MFS general substrate transporter 115 449 IPR036259 -
Tsu06g00795 1082 Gene3D - 991 1077 - -
Tsu06g00795 1082 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 472 1082 IPR039757 GO:0001731|GO:0003743
Tsu06g00795 1082 SUPERFAMILY PUA domain-like 574 650 IPR015947 -
Tsu06g00795 1082 CDD MFS_OCT_plant 86 445 - -
Tsu06g00795 1082 SUPERFAMILY SWIB/MDM2 domain 878 979 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00795 Tsu-Chr6 7098114 7115907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00795 30 445 Organic Solute Cotransporters AT1G16390 49.526 6.91e-144 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00795 K15027 - gmx:100776835 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00795 06 7098114 7115907 Tsu06g00795 06 7098114 7115907 ECH