Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00767 ATGGCTAATTTCAAGTTGGCATGTGTTGTTTTAATGTGCATTGTTTTGTTGTATGCACAAAATGGATATGCAGTTACATGTGGAGAAGTCGTAAATAACATTATACCATGCATAACTTATCTTCAGATTGGGAATTCCGTTACGGCGAATTGTTGTAACGGTGTCAAAGCGATCTTTCATGCGGCGGTTAGGAGCATCACTGACCTCCGCACTACTTGCTACTGCTTGAAGTCTGCTGCTCAGAATCTCAAAGGatcaattaaacaaaacaatgcAGCTTCACTCCCTAGCAAATGTGGAGTTAACGTCCCTTACAAGATCGGTCCTTCCATCGACTGTGCTAGCATCAAGTGA 354 0.404 MANFKLACVVLMCIVLLYAQNGYAVTCGEVVNNIIPCITYLQIGNSVTANCCNGVKAIFHAAVRSITDLRTTCYCLKSAAQNLKGSIKQNNAASLPSKCGVNVPYKIGPSIDCASIK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00767 117 Pfam Probable lipid transfer 20 105 IPR016140 -
Tsu06g00767 117 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Tsu06g00767 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Tsu06g00767 117 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Tsu06g00767 117 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Tsu06g00767 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 115 - -
Tsu06g00767 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 115 IPR036312 -
Tsu06g00767 117 PANTHER - 1 115 IPR000528 GO:0006869|GO:0008289
Tsu06g00767 117 SMART aai_6 27 113 IPR016140 -
Tsu06g00767 117 CDD nsLTP1 25 113 - -
Tsu06g00767 117 Gene3D - 24 117 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00767 Tsu-Chr6 6837288 6838253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00767 4 117 Acyl Lipid Metabolism Gene Families AT2G38530 39.130 1.76e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00767 - - csin:114259269 116.316