Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00751 ATGTGCAATGGTGCTGAATCTCGAGGAAATATAAATGGTGAGGTTGTGATATCAAAGGTTGAGAATTACCATGAAGAGAGAATGCAAAATATAGAAGGTGTTGAAAGAGAATGTAACTCATGTGGTAGAGGACTAAATATTCTTCAACGTTTACATCATCGTCTAAATTCTCTTCTTCCTACCATTTCAGTATCTGAGGTGAAAGAAGAGTTGCAATCGCTTGCGAAGATTGCTTGTCCAATAACAATGACAAGCCTAATGATGTATTCACGATCAGCTATCTCAATGCTTTTCCTTGGTCGTCAAGGAAGAGCAGAGCTAGCTGGCGGTTGCCTAGCACTGGGTTTCGCCAACATAACCGCAAATTCAGTTCTCAAAGGCCTAACAATGGGAATGGATCCAATTTGTTGTCAAGCATTTGGAGCTAAAAGATGGTCAGTTCTAAACCAAACATTTTTCAGAACTGTTTGTCTCCTCTTACTAGTTACAATCCCAATTTCACTTTTATGGCTAAACATGGAACCACTCCTTCATTTACTTGGTCAAGACCCTAGTGTCACAAAAGTTGCACAAATTTACATGCTTTATTCAATTCCTGAATTATTAGCTCAGTCTTTCCTCAATCCATTAAGAACTTTCTTAAGAACTCAAGGCTTAACAACACCAGTTACTATGGCAGCATCAATTGCAGCACTATTGCACCTACCAATGAATTATTTCCTAGCTACATATTTAAAATTAGGTGTAAAGGGTATTGCATTAGCCACTGGAATGAATTCCATAAACATAACATTGTTCATGTTggtttatgttgttttttcaaAGAAATCACTTAAGCCATGGCAAGGTGTTACaatatttaactcattttttcatGGTTGGAAACCATTGCTTAGTCTTGCAATCCCTAGTTGTCTTTCTATTTGTTTAGAATGGTGGTGGTATGAGATAATGCTCTTTCTTTGTGGTTTATTAAGGAACCCTCAAACTTCGGTTTCAACTATGGGAATACTTATTCAAACACTTGGTTTTCTTTACGTGTTCCCATTTTCACTGAGTGCGTCTTTGACAACAAGAATCGGTCATTCATTAGGGTCAGGACAAGCCTCGCGTGCACAAGGAACGGCTATAATTGGAATTTTGATAGCATTTTTACTTGGAACTTCGGCTTTTATTGGATTGATTTTAGTGAGAAAAAATTGGGGAAAATTATTTACCGACGAGGTACAAATTATTGATATGATAAGAAAAATACTTCCGATTTTAGGGTTATGTGAAATTAGCAATTGGGCACAAACGGTATCGTGTGGGATTTTAGCTGGAACCGCACGTCCTTACGTTGGTGCTAGAATAAATTTGTGCGCATTTTATTTGATTGGGTTACCGATTTCGATCTTTGCTACATTTGTGTACAACTTGGGATTGGTAGGTTTGTGGTACGGAATGTTGGCAGCACAAGTCTCTTGTGTTTGTATGATGGTGTATACTTTGATTCAAACTGATTGGGGACAACAAACTAGAAGAGCATTGGAGTTATCTCAGAAATCAGCTGAGCAAGAAAGTGTCATTGATGAGGAAAGTGTGTTGCTCGATTCTCTTTAA 1602 0.372 MCNGAESRGNINGEVVISKVENYHEERMQNIEGVERECNSCGRGLNILQRLHHRLNSLLPTISVSEVKEELQSLAKIACPITMTSLMMYSRSAISMLFLGRQGRAELAGGCLALGFANITANSVLKGLTMGMDPICCQAFGAKRWSVLNQTFFRTVCLLLLVTIPISLLWLNMEPLLHLLGQDPSVTKVAQIYMLYSIPELLAQSFLNPLRTFLRTQGLTTPVTMAASIAALLHLPMNYFLATYLKLGVKGIALATGMNSINITLFMLVYVVFSKKSLKPWQGVTIFNSFFHGWKPLLSLAIPSCLSICLEWWWYEIMLFLCGLLRNPQTSVSTMGILIQTLGFLYVFPFSLSASLTTRIGHSLGSGQASRAQGTAIIGILIAFLLGTSAFIGLILVRKNWGKLFTDEVQIIDMIRKILPILGLCEISNWAQTVSCGILAGTARPYVGARINLCAFYLIGLPISIFATFVYNLGLVGLWYGMLAAQVSCVCMMVYTLIQTDWGQQTRRALELSQKSAEQESVIDEESVLLDSL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00751 533 TIGRFAM matE: MATE efflux family protein 80 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g00751 533 CDD MATE_eukaryotic 70 508 IPR045069 GO:0042910|GO:1990961
Tsu06g00751 533 Pfam MatE 80 240 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g00751 533 Pfam MatE 303 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu06g00751 533 PANTHER MULTIDRUG RESISTANCE PROTEIN 54 519 - -
Tsu06g00751 533 PANTHER PROTEIN DETOXIFICATION 53 54 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00751 Tsu-Chr6 6648368 6653807 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00751 K03327 - gmx:106798137 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00751 06 6648368 6653807 Tsu06g00751 06 6648368 6653807 ECH