Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00750 ATGGTGGATTATTTTAATCATAAAGCAAATATATCAGGGAGATTTCCTCTTGGGAGCTTCAACTCGGCATTTAGCTTTACTGGTTCAAAAGATGTAGATGCTGCAGCTACAAAAACCTTGTCTTCAGATGGATTTTACATTCCCCTTGCAAAGGTCCAGCTTCAAAAACCGAACTTAATGTTGGGAGAAAATGTCAAAAAGGCTATCCCAGTCAATTGGGATCCACCATCCTTGGCGAGCTTCATTGAAAATTTTGGGACGCATATAATTACATCGATAACTATCGGTGGTAAAGATGTTATTTACGTCAAGCAACACAATACTTCACCTTTGTCAAAGTTGgagataaaaaattacattcaaGATATTGGAAATCAGAGGTTTTCTGACATCAATAGCCACACAAGTTCAGGTCAAACAAAACCCAAGGATAAGGGGGTTGAACCATTTTCATTCAATAGTCAAGGGATTTACCCTCAACCTACAACAGCAACATATCCTACCGGGAAAGAAGATGTCACAGTAATTTTTAGAAGAAGAGGAGGGGATGATTTGGAACAAAATCACAGTGTATGGTTACAAACTGTCAAGTCTTCCCCAGATATCATAGAGATGACTTTCTGTCCTATAACCGATCTCCTTGATGAAATACCTGCTAAGGAGCACTTGACGCGTGCCATTGGTCTTTATCTTGAATATAAACCCCCAATTGAAGAACTTAGATACTTCCTAGAGTTTCAGATTCCTCGTGTTTGGGCTCCTTTACACGACAGGATTGCCGGTCAACAAAGGAAAGAACCTGTTTGTCCATCTTTGCAATTCAGCATAATGGGCCAAAAACTTTATGTCAGTCAAGAACAGATTACAGTTGGACGTAGACCAGTAACTGGCATACGTCTTTGTCTCGAAGGAAGCAAGCAGAATCGGCTGAGTGTTCATCTTCAACACTTGGTATCCCTTCCAAAGATCCTTCAGCCATATTGGGATAGCCATGTGGCTATTGGTGCTCCCAAGTGGCAGGGACCCGAGGAACAAGATAGCCGGTGGTTTGAGCCGGTTAAGTGGAAGAATTTTTCTCATGTCAGCACTGCGCCCATTGAGAATCCCGAAACCTTCATAGGAGACTTCTCCGGTGTCTGCATAGTCACTGGAGCACAGCTTGGAGTATGGGATTTCGGATCACGGAATGTACTTTACATGAAGCTCTTGTATTCAAGGTTACCCGGCTGCACGATCCGAAGATCACTTTGGGATCACATACCAAACAAACCACTAAAATCTACTACTTCCGGCAACACTTCAAACGCAGACGATACGACGAACCTCAGCTCAAGAGAAAACAACTCTACAACAAACAAGTTAGTGAAGTATGTTGACTTGTCGGAAATGAGCAAAGGACCTGAAGATCCTCCTGGTCATTGGTTAGTTACCGGCGGAAAACTTGGTGTCGAAAAAGGGAAAATCATTTTGAGATTGAAATATTCATTGCTTAATTACTGA 1500 0.416 MVDYFNHKANISGRFPLGSFNSAFSFTGSKDVDAAATKTLSSDGFYIPLAKVQLQKPNLMLGENVKKAIPVNWDPPSLASFIENFGTHIITSITIGGKDVIYVKQHNTSPLSKLEIKNYIQDIGNQRFSDINSHTSSGQTKPKDKGVEPFSFNSQGIYPQPTTATYPTGKEDVTVIFRRRGGDDLEQNHSVWLQTVKSSPDIIEMTFCPITDLLDEIPAKEHLTRAIGLYLEYKPPIEELRYFLEFQIPRVWAPLHDRIAGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGIRLCLEGSKQNRLSVHLQHLVSLPKILQPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVCIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNKPLKSTTSGNTSNADDTTNLSSRENNSTTNKLVKYVDLSEMSKGPEDPPGHWLVTGGKLGVEKGKIILRLKYSLLNY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00750 499 Pfam MAC/Perforin domain 18 230 IPR020864 -
Tsu06g00750 499 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 1 499 - -
Tsu06g00750 499 SMART MACPF_8 37 232 IPR020864 -
Tsu06g00750 499 MobiDBLite consensus disorder prediction 130 165 - -
Tsu06g00750 499 MobiDBLite consensus disorder prediction 424 448 - -
Tsu06g00750 499 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 1 499 IPR044663 GO:0006952|GO:0012501|GO:2000031
Tsu06g00750 499 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 244 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00750 Tsu-Chr6 6633213 6639242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00750 - - aprc:113849343 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00750 06 6633213 6639242 Tsu06g00750 06 6633213 6639242 ECH