Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00741 ATGTGTAGCTCAATGGTTTTGCTGAGGGTTACTTGCTTGGCAATGATGATATGCATGGTTTTGGGACTACCACAAACTCTTGTTGCTCTCACTTGTGGTCAAGTTAACACAAAATTAGCACCATGCATCGCGTACGTGACGGGAAGTGGTAGTGATGTCCCCCGATCGTGTTGCAACGGTATTAAGGTCATAAACAATGAAGCCAAGACCAAATCTGATCGTCAAGCTGCCTGTAGGTGTATCAAAACCACCGTCAGCGAGCTCCGTGATCTGAATGTAGAAAAACTTGCTGGACTCCCTAGCAAATGTGGAGTTCACTTGCCTTATAAGCCAAGTCCATCCACTGATTGCAACAAGATTGAGTAA 366 0.4508 MCSSMVLLRVTCLAMMICMVLGLPQTLVALTCGQVNTKLAPCIAYVTGSGSDVPRSCCNGIKVINNEAKTKSDRQAACRCIKTTVSELRDLNVEKLAGLPSKCGVHLPYKPSPSTDCNKIE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00741 121 PANTHER - 1 119 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 120 IPR036312 -
Tsu06g00741 121 Gene3D - 29 121 IPR036312 -
Tsu06g00741 121 SMART aai_6 32 117 IPR016140 -
Tsu06g00741 121 CDD nsLTP1 30 118 - -
Tsu06g00741 121 PANTHER LIPID TRANSFER PROTEIN 1 119 - -
Tsu06g00741 121 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 PRINTS Plant phospholipid transfer protein signature 52 66 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 PRINTS Plant phospholipid transfer protein signature 73 88 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 PRINTS Plant phospholipid transfer protein signature 108 119 IPR000528 GO:0006869|GO:0008289
Tsu06g00741 121 Pfam Protease inhibitor/seed storage/LTP family 32 117 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00741 Tsu-Chr6 6570563 6572253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00741 4 121 Acyl Lipid Metabolism Gene Families AT5G59320 44.915 2.19e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00741 - - mtr:MTR_4g028190 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00741 06 6570563 6572253 Tsu06g00741 06 6570563 6572253 ECH