Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu06g00730 | aTGGATTATTCAGGCTATAACCCTAACCAACCACaacctcaacaacaacaatcgtATTACGAATACGATCCATCTCAGATTCAACTTCAACCCTACGATCAATCTTATGCTGCTACTGCTGCAGCATATCAATCTTCTTATTACGCTGCTTATAATCAAACCTATGCTTCTTATTATCCAACTGATTCAACAACATCACagcttcaacaacaacaacaaccgaTTAATTATTATCAACAATCTGAACCCGCTCCGGTTCATCCTCCTGGTGTTAATCCTGAACCGGTTCAGCTTAATAATCTTCCGATCGGGTCATCTTCTCAATACAGAGGTGGGGGTGGTAGATCATTCAGGCGGGGTGGTCGTGGTCGAGGTCAGTTCAGTCGTGGAAGAGGACGTGGAGTGGGTAGTGGGAGAAACTTTCCGTCTCATTCTTCTGGAGTTGCTATTTCTGATGTACATGGTGCGTCTGCTGCTGGAGCCACTTATGCGGTACAAGGTTCATCATCAGTCTCAGCTCAAGTTCAAACTGCACCAGTGCAACCGCCACCACATGGGGTATTTTGTGATATTTGTAAAATTGAGTGCAATACCTCAGAAGTCATGCAGGTGCATCTGAAAGGAAAAAAGCATCTGAAGAATATGAGATTACATGAAGCAAAACAGAGACACGGTGCTATCAACGGCTCAGAGAGTAGTCAGATTCCTACCTCTCAATTGAACTCAACAGAGCAACCTATGATAGCTCAGGAATCTGAGGACCCCACCAAAAACATGAGCTCTGAAATTGCAGCTGATAATAACAATGTTGAAATAAAGTTGCAGAATAATATAGGAGAGACTTCTGGTGTTCAAGCTGAAGAGCCTGAGGGGTTAAGTATAGAAAACTCTGGTGCAAGAGGCCGTGGATTGAAGCGTAAGTTAAGAGGAGGAAAAGGACGTAAACAGGCGAGGACTGCTGATGGTTCAAATCCTGAACAAGCTGTAGCTATTACATGTGAGTTGTGCAATGTTAAATGTGACACCCAACGCGTTTACCAGGCTCATATTAGTGGGAAAAAGCACATGAAGCGTGCCTATGGTCCCCAAGCAGTAGGTAACCAACCTTTGGCCAGAGTAGGTAACCAAGCTCCGTCTGAAGCTTTGTCTGCAGTAGCAGGGCTTCAAGCACTTTACCCACCTGACATCAATGCTCTAGCCAATGCAATTAATGCTCAAGTCCAACAAGGTGATAACGATCCACAGGTACTTCTGGCTCAGCTCCTGGTGAATGCACTATCTCAAGCACAAGGATCAACAGCAGCACCAGCGAATGGCTCCTTGGCTGCTCAGACACCAACACCCATAGCTGGGGCCGGTTCAAGTTATGATCCCCAGTTGGTGCAGGCTCAAGTCTCGGAAGCCGTAGCGCATGCTGGGGTGGGAAATCTTACTGAAGAATCAAAAAATGAGACTGTATCTGTTCCACTGGAATCAAATGCACATGAAGGTTCAAATGTTGGCTCCCAAAATGAAGGTGGAAGTTCTGAAACTAAATAG | 1539 | 0.4399 | MDYSGYNPNQPQPQQQQSYYEYDPSQIQLQPYDQSYAATAAAYQSSYYAAYNQTYASYYPTDSTTSQLQQQQQPINYYQQSEPAPVHPPGVNPEPVQLNNLPIGSSSQYRGGGGRSFRRGGRGRGQFSRGRGRGVGSGRNFPSHSSGVAISDVHGASAAGATYAVQGSSSVSAQVQTAPVQPPPHGVFCDICKIECNTSEVMQVHLKGKKHLKNMRLHEAKQRHGAINGSESSQIPTSQLNSTEQPMIAQESEDPTKNMSSEIAADNNNVEIKLQNNIGETSGVQAEEPEGLSIENSGARGRGLKRKLRGGKGRKQARTADGSNPEQAVAITCELCNVKCDTQRVYQAHISGKKHMKRAYGPQAVGNQPLARVGNQAPSEALSAVAGLQALYPPDINALANAINAQVQQGDNDPQVLLAQLLVNALSQAQGSTAAPANGSLAAQTPTPIAGAGSSYDPQLVQAQVSEAVAHAGVGNLTEESKNETVSVPLESNAHEGSNVGSQNEGGSSETK | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 226 | 260 | - | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 474 | 512 | - | - | |
| Tsu06g00730 | 512 | PANTHER | OS06G0651300 PROTEIN-RELATED | 1 | 93 | - | - | |
| Tsu06g00730 | 512 | SMART | ZnF_U1_5 | 184 | 218 | IPR003604 | GO:0003676|GO:0008270 | |
| Tsu06g00730 | 512 | SMART | ZnF_U1_5 | 328 | 363 | IPR003604 | GO:0003676|GO:0008270 | |
| Tsu06g00730 | 512 | SUPERFAMILY | beta-beta-alpha zinc fingers | 180 | 223 | IPR036236 | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 223 | 260 | - | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Tsu06g00730 | 512 | Pfam | Zinc-finger of C2H2 type | 332 | 355 | - | - | |
| Tsu06g00730 | 512 | SMART | c2h2final6 | 331 | 355 | IPR013087 | - | |
| Tsu06g00730 | 512 | SMART | c2h2final6 | 187 | 211 | IPR013087 | - | |
| Tsu06g00730 | 512 | SUPERFAMILY | beta-beta-alpha zinc fingers | 330 | 358 | IPR036236 | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 80 | 148 | - | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 478 | 512 | - | - | |
| Tsu06g00730 | 512 | PANTHER | OS06G0651300 PROTEIN-RELATED | 99 | 481 | - | - | |
| Tsu06g00730 | 512 | Gene3D | Classic Zinc Finger | 173 | 220 | - | - | |
| Tsu06g00730 | 512 | Gene3D | Classic Zinc Finger | 312 | 360 | - | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 284 | 325 | - | - | |
| Tsu06g00730 | 512 | PANTHER | GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE | 1 | 93 | - | - | |
| Tsu06g00730 | 512 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - | |
| Tsu06g00730 | 512 | Pfam | Zinc-finger double-stranded RNA-binding | 188 | 211 | IPR022755 | - | |
| Tsu06g00730 | 512 | PANTHER | GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE | 99 | 481 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu06g00730 | - | - | vra:106780092 | 350.132 |