Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00729 ATGTGGACGCATCAACTTCTACAACCACTGCCACCCTACAATCTCTTCAACTCTCATTCACCTTCAAAACTTACAAAAATTCCATCTTTTGCAAAATTGAATTCGACCCAgaacacaaaaaatcacaatGGAACTTTGAACTCAACAATATTAACTTTGGAAGAGCTTCCTCCAAACGCACTTCTAAGGAAGAAAAAAGAAGCAGATTGGATTGGAGGGTTCTCTCTTGGTATCGACTTGGGAATGGCTCGTACTGGCCTTGCTATCAGCAAAGGCTTTACTGTTCGCCCTTTAACAGTTTTGGGACTGCGAGGACAAAAGCTCGAACTCCGCATTATGAGCATTGCTGAACAAGAGGAAGTTGATGAGTTTATAGTTGGACTTCCAAAATCTTCTGATGGAATGGAAACAACACAGTCAAATATAGTCCGTAGTGTTGCTGGAAGGCTTGCTGTTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAATATGGGACAACAACAGCCGCCATGAATCGAATGGTCGACATGGGCTTGAGTAAGTTCACTAGGCAGAAGAAGATTGATGCCTATGCTGCCACGATGGTACTTGAGAGATATTTCTCCACATCAGGTCAGAAAACTGAACTTGTTGTGCCCAAGAATCTTGAACTACAAGGAAAACTTAGAAAGGGTCCTCCCAAAGATGAAGATTTTTTCTCCGACGATGATGTTATCTTCGACGAAGATTAA 741 0.417 MWTHQLLQPLPPYNLFNSHSPSKLTKIPSFAKLNSTQNTKNHNGTLNSTILTLEELPPNALLRKKKEADWIGGFSLGIDLGMARTGLAISKGFTVRPLTVLGLRGQKLELRIMSIAEQEEVDEFIVGLPKSSDGMETTQSNIVRSVAGRLAVRAAERGWRVYLQDEYGTTTAAMNRMVDMGLSKFTRQKKIDAYAATMVLERYFSTSGQKTELVVPKNLELQGKLRKGPPKDEDFFSDDDVIFDED 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00729 246 Pfam Holliday junction resolvase 75 205 IPR005227 GO:0006364
Tsu06g00729 246 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 10 239 IPR005227 GO:0006364
Tsu06g00729 246 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 10 239 - -
Tsu06g00729 246 Gene3D - 75 213 IPR037027 GO:0006139
Tsu06g00729 246 Hamap Putative pre-16S rRNA nuclease [yqgF]. 73 208 IPR005227 GO:0006364
Tsu06g00729 246 SUPERFAMILY Ribonuclease H-like 74 206 IPR012337 -
Tsu06g00729 246 SMART rnase_8s 73 173 IPR006641 GO:0006139
Tsu06g00729 246 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 76 204 IPR005227 GO:0006364
Tsu06g00729 246 MobiDBLite consensus disorder prediction 224 246 - -
Tsu06g00729 246 CDD YqgF 76 204 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00729 - - lja:Lj3g3v1440180.1 336.265