Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00728 ATGGCTCACCGTCAACTTATGGACTCACTCACTTCTCACATCTCCCTTTACCATTCCCAATCCccaaaccctaaccctaaccctaaccctaGATCTTCCATTCTCAAATGgttctcttctctctcaattcACCACCGTCTCTCTCATCTCACAATCCTCGATTCCAATTTCGTCCAAATTCTCCTCCAAATGCTGTTCAAACTTCAATCCAACAGCAATCACGGTTGTTTCATCCTCCTCCCTGATCTTCCCTCTCGCGATCCGCTCTTACCGACTCTCTGCTTCAAAAAATCACACGGTCTAATTGCTCGTATTGCGGATTCGGATACTGCTggaaagttgatttttgattcTGTTCGGGTTTTTGCTTCCCGGGAAGGGGAAGATGCAGGGAAATGTTCGTGTGATGCGAGGTGTCTTGACACGGTAACGTTTTGTGAAGGGATTGTGGAGGATGTGGATAGATTTGTGGATGTGATGGATAAGATTTCGGGAGGTGGGTTTCTTAGAGGGGAAGAAAATGAGATTGGTGAGGATTGGGTTGAATTGAATTGGTTGAAATCAAAAGGGTATTATGGGATTGAGGCTTTTATTGCGAATAGGATCGAGGTTTCGATTAGGTTAGCTTGGTTGAATAGTTGTGGTGGGAAGAAAAGAGGTGTGaaattgaaagagaagttgaatGTGGCTAGTATTGCTGCTAATGTGTATTGGAGGAAGAAGGGTTGTGTTGATTGGTGGGGGAATTTGGATTATGTTACAAGGAAGAAGGTGTTCAACACGATTATCATGAAATCGGCTAAAGCTTTGACGTATGAGGTTTTGAAAGTGGCAAGCACTGCTCCCGAAGATGAGGTTTGGCTATACAGTAGGGGAATGGGTGTTGATAAACTACTTGACTATAATTGTACTGGATCTGCTCAAAGGACCACCCGAGCATTTCGTGATGATACAGAGTTTGGCAGAATTATTACACCTGTCAGTGTTTGTAAAAAGCCTGCAGCTTTAGCTAGAGCCTTTAATTCCCTATCTGTGCTTCAAGACATTAACATAATGTTGACATCAAGTATTAATAGTGAATATGATATAGGAACTCTTTTCTTTAGTTCGTTGGCTTCTGTCTCCACAATATCTGATtgcatattaagaaaattgaGAGGTTTTCTGATGGTTATTTCACTTGACTGCACAAAACATGAGCTACTAGAGGAGGAACATGACAAATCCTCATTGGGTAAACCTAAGGAAAAACTTAGTGTTTCTAACCGTAAAAAGAAGGGACGGACCCGCAATAATAAAAGGCAAAATCCTGCCCCAAAGACACCTGTGAGCGGTATTTCATGCGAAAATCTTCATAagGACATTGATTGTGTAGTAGACAATAAAAAGAAGACTGATTCAACGAAACCCAGGGAACTTCCGCAAGTTCCTCTGGGAAAAAACGATATTTCTAACGGGAGCTCCTCATCACCTGTAAAAATTGTAGATTATACTCGAGAATCGAACGTTGGCAAACCTCGAACCACTCCAAGAAAAagtagaaaagagaaaaataaaaataaaaataaaagcacTCTTGTTGACAGTGCAGTTGTAGATTCTCACAAGTCAGTAACGCATGCTGCCTCTACCACTGTTGTTTCTAAAGGTGAGGTGGAAATATGTGATAGGTCTTTTGATAGTTCTACCATTCAGAATGTCAAAAACAAAGATTCTATTGGTAATGACATCCTTGTCTCAAATTCAATCCCTTGTTCTCTTAATGAACCTGCTAAGGAGAACAGCTCTACCGGGAAAGTTGAAGGAAAGAACGTTGATGATCTTGCTGAAAGTTGCAATAGTTCAGGTTCTCAGTTTTGTATATCGCCAAATGAAAGGAAAACGTTGTCTTGTGAATTAGATACTCACATTGTAGAATGTAAAACTATAACACAACCTGTACCTGCATTGAAGCACAGCAATTTCTCCAGCAATGAAGGTACATGTTCTTTGAACACAACAGGTGCTACCAAAGCTGATGTGAAGTCAACTATTTATGACAAACCAATTAGAGAGGTTAATGTAAAAGAATTTGGCATGTTGAAGGAGAGAGATAGATGTCTATTTGAAAGTAGAAACTCTGCTTTCTCAAAATGCAGTCCGTATGAATGGCCTGGTATACCTTCTATCTATTTTCCATCTTTTAATTCTCATCTCCCTCCGGCAACAGACAGATTGCATCTGGATGTTGGACGCAATTGGCATAATCACTTCTGCCACCCATTTGTTCCCACATTACCGCAAGCAAGAAATACACCAATTGAAGGTGGATGTAACCAAATTATGCCTCGTCAAATTCCTATGAGTTTTGACTGGCCCCCTGTTTTTCGTGGTGGCATGACCCCATCACCAAATTGTAAATATGACTCTGGGTTTATGTCTAGGAGACAATGTAAATTTTCAAAAGGGTTGGCTGTTCACAGCATGCATCTTGATGTAACAACTTCTGATGATGAAAGGAAGTACTCTGGGGATACATTGGATTTACCTGACCTGATAAATACACAGTTTACAGATGAATATGACAACCTCTATGTATCAGAGGAAGAGTATGATTTCCACGCTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGCGGTGTAATGTACTGGAACCCTTCCGAGCATTCAGGAAAAGGTTTTTCTCGGCCTCCCTCTCTCAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATCAAACAGTGGATGATATGGTTGCTTTCTCTTCTTCATATAGTACAAATGGTTTAGCATCACCAACTACTGCGACGTTTTGCTCTCCCTTTGATCCTGTAGGGACTGGGCCCCAGACTGTTGGTTATGTAATGTCTGGTAATGATGTACCTGGGAAAGTGATGCATCCTTCGTCAGTTACTGATGCCGCAGTGGATGATGATACTTCTGGTTCTTTGGGTAATAACATACCTGGAGAAATTGAAGGGAAGGCTGGTGATTCACATCCATATCCCATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTCTATATGTGTTGATCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCACCATCACCTGTGGTGCTTTGTGTACCGCGTGCACCACGTCCTCCCCCACCCTCCCCTGTGAGTGACTCTAGGAAACAAAGGGGTTTTCCAACTGTTAGGTCTGGTAGTTCCAGCCCAAGACACTGGGGAATGAGAGGTTGGTACCATGATGGAAGTAATTTAGAGGATACTTGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTCTTGGAGAGGTAAAAACATTGCAGTGCAACCTCTGATCCAACCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCAATGTCACAGATAGCACGCGACCAGGAACATCCGGATGTCACCTTACCTCTGCAACCTCCTGAGTTACGAAGCTCTTCTGCAACGAGCGCATCTTTATCTTTGATGCATGGAATGCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCGGCAGAAAACATGGCAAGGAGGCCTTGCATTAATTGGGCTGTCAAGAGAGTTACCCGATCTCTGCAGGTTTTATGGCCCAGATCCAGGACAAATATATTTGGTTCCAATGCCACTGGTATGGCTCTTCCCACAAGTGATGTTGACCTTGTGGTATCTCTCCCTCCAGTGAGGAACCTGGAACCCATCAAAGAAGCTGGAATATTGGAAGGCCGTAATGGTATTAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGAATGGGTAAAAAATGATTCTCTGAAGACAGTGGAAAATACTGCTATACCTATTATTATGCTCGTGGTGGAAGTACCAGAGGATGTTATCACTTCATCAGCTCCTACATTACATTCATTAAAAGAAAAGTCACATTGTACAACTGGTGAACATGGTAATGACAATCATTCTGATATGATCCAGCTAGAAGATTCAGCTTCGCTGAAAAGGTCTCAAACTAATTTTTATGCTTTGAAAGATTCCAAATCAGTTCGCGTTGACATCAGCTTTAAGTCCCCATCACATACAGGACTCCAAACTACAGGAATGGTTAAGGAGTTGACGGAACAATTTCTTGCTGCTACTCCTCTTGCTTTGGTGCTAAAACAGTTTTTGGCAGATCGGAGCCTTGACCAGTCCTACTCCGGTGGCTTAAGTTCCTACTGTTTGGTATTATTAATTATACGTTTTCTTCAGCACGAGCACCATCTTGGCCGGCCAATCAACCAAAATTATGGACGTCTTCTGGTGgattttctttacttttttgggaATGTGTTTGATCCTCGTCAAATGCGGATATCGGTGCAGGGAAGTGGACTTTATATAAAGAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGATCCTCTTTTTCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAAAATGAACTCACATTCCTAAATGGTGATGGTGAGTCATGCTCAAGGTCATCTTACAGACTACTTCCAAAAATTATCCCGTGTCTTGATGTATCATAA 4662 0.4078 MAHRQLMDSLTSHISLYHSQSPNPNPNPNPRSSILKWFSSLSIHHRLSHLTILDSNFVQILLQMLFKLQSNSNHGCFILLPDLPSRDPLLPTLCFKKSHGLIARIADSDTAGKLIFDSVRVFASREGEDAGKCSCDARCLDTVTFCEGIVEDVDRFVDVMDKISGGGFLRGEENEIGEDWVELNWLKSKGYYGIEAFIANRIEVSIRLAWLNSCGGKKRGVKLKEKLNVASIAANVYWRKKGCVDWWGNLDYVTRKKVFNTIIMKSAKALTYEVLKVASTAPEDEVWLYSRGMGVDKLLDYNCTGSAQRTTRAFRDDTEFGRIITPVSVCKKPAALARAFNSLSVLQDINIMLTSSINSEYDIGTLFFSSLASVSTISDCILRKLRGFLMVISLDCTKHELLEEEHDKSSLGKPKEKLSVSNRKKKGRTRNNKRQNPAPKTPVSGISCENLHKDIDCVVDNKKKTDSTKPRELPQVPLGKNDISNGSSSSPVKIVDYTRESNVGKPRTTPRKSRKEKNKNKNKSTLVDSAVVDSHKSVTHAASTTVVSKGEVEICDRSFDSSTIQNVKNKDSIGNDILVSNSIPCSLNEPAKENSSTGKVEGKNVDDLAESCNSSGSQFCISPNERKTLSCELDTHIVECKTITQPVPALKHSNFSSNEGTCSLNTTGATKADVKSTIYDKPIREVNVKEFGMLKERDRCLFESRNSAFSKCSPYEWPGIPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLPQARNTPIEGGCNQIMPRQIPMSFDWPPVFRGGMTPSPNCKYDSGFMSRRQCKFSKGLAVHSMHLDVTTSDDERKYSGDTLDLPDLINTQFTDEYDNLYVSEEEYDFHAVSGIDYNQYFGGGVMYWNPSEHSGKGFSRPPSLSSDDSLWALREADMNQTVDDMVAFSSSYSTNGLASPTTATFCSPFDPVGTGPQTVGYVMSGNDVPGKVMHPSSVTDAAVDDDTSGSLGNNIPGEIEGKAGDSHPYPILRPIIIPNLSRERSICVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSNLEDTCLRMDGAEVVWPSWRGKNIAVQPLIQPLPAALLQDRLIAMSQIARDQEHPDVTLPLQPPELRSSSATSASLSLMHGMLHDEIDSFCKQVAAENMARRPCINWAVKRVTRSLQVLWPRSRTNIFGSNATGMALPTSDVDLVVSLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKNDSLKTVENTAIPIIMLVVEVPEDVITSSAPTLHSLKEKSHCTTGEHGNDNHSDMIQLEDSASLKRSQTNFYALKDSKSVRVDISFKSPSHTGLQTTGMVKELTEQFLAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGRLLVDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELTFLNGDGESCSRSSYRLLPKIIPCLDVS 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 419 433 - -
Tsu06g00728 1553 Gene3D Beta Polymerase, domain 2 1194 1310 IPR043519 -
Tsu06g00728 1553 SUPERFAMILY Nucleotidyltransferase 1181 1388 IPR043519 -
Tsu06g00728 1553 Pfam Nucleotidyltransferase domain 1207 1250 IPR002934 GO:0016779
Tsu06g00728 1553 Gene3D - 1350 1547 - -
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 1050 1066 - -
Tsu06g00728 1553 PANTHER POLY(A) RNA POLYMERASE 671 1548 IPR045862 GO:0004652|GO:0031499|GO:0043631
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 480 496 - -
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 1030 1084 - -
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 405 447 - -
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 462 529 - -
Tsu06g00728 1553 SUPERFAMILY PAP/OAS1 substrate-binding domain 1396 1526 - -
Tsu06g00728 1553 MobiDBLite consensus disorder prediction 1069 1083 - -
Tsu06g00728 1553 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 671 1548 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00728 - - mtr:MTR_4g027425 2583.13