Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00727 atGAAATTTGGGAAGAGACTTAAGCAACAAGTTCAAGATACTTTGCCAGAATGGAGGGACAAATTTTTGTCATataaagaattgaagaaactgTTGCGACTTTTAGCAACGGCACCAACATCGTTGCTAAATGGTTCTTCAATTGAGTATGGAAAAACTGAGGCTGAGTTTATGTATTTGTTGAACAATGAGATTGATAAGTTCAATGGATTCTTCATGGAACAAGAAGAGGATTTCATTATAAGACACAAGGAAGTACAACAAAGAATCAAGAGAGTAGTTGATTTGTGGGGACCAAATGGTAGTCAGCCTTCAGAAGCAGATTATAAGGAGGAAAtggaaaaaattagaaaagctATTGTTGATTTTCATGGTGAAATGGTTCTATTAGTAAACTACAGCAACATTAATTATACAGGGTTGgctaaaattttgaagaaatatgATAAAAGGACAGGAGGACTACTTCGTTTGCCATTCATTCAAAAAGTATTGGAGCAACCCTTTTTCACGACCGATCTAATTTCAAAACTCGTGAAAGAATGCGAAACCATAATTGATGCAGTGTTTCCGGCTGAGGAAGAAGCTGAAAGAGCGAAAGAAGCAAAAGAAGCTATAGTAGTAGCTGGAGAAGGAATTTTTAGAAACACGGTCGCGGCTTTACTTACAATGCAAGAAATGAGAAAAGGTAGCTCAACACAAAGTGCATTTTCTTTGCCTCCTCTCAATTTGCCAGACTCTGATCTCATTCAATCCATACAACTTAATGCAGCTGTTCCAATTGTTTAG 789 0.3473 MKFGKRLKQQVQDTLPEWRDKFLSYKELKKLLRLLATAPTSLLNGSSIEYGKTEAEFMYLLNNEIDKFNGFFMEQEEDFIIRHKEVQQRIKRVVDLWGPNGSQPSEADYKEEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECETIIDAVFPAEEEAERAKEAKEAIVVAGEGIFRNTVAALLTMQEMRKGSSTQSAFSLPPLNLPDSDLIQSIQLNAAVPIV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00727 262 CDD SPX_AtSPX1_like 2 151 - -
Tsu06g00727 262 ProSiteProfiles SPX domain profile. 1 162 IPR004331 -
Tsu06g00727 262 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 260 IPR031142 GO:0016036
Tsu06g00727 262 Pfam SPX domain 103 163 IPR004331 -
Tsu06g00727 262 Pfam SPX domain 1 34 IPR004331 -
Tsu06g00727 262 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00727 Tsu-Chr6 6390166 6393868 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00727 - - gmx:100778590 444.121