Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00721 ATGTTTAATAAAGAGTCTGGCTACGAGGTTGAAGATTACAAATTGAAAGTTGTCTATGTTGCTCCTCCTCAACCAGCATCCTCAGTTCGAGAAGGATCTGATAAAGAttcaaaagcttcaaatgaacaGGTTGAACAATGGGATACTTCATTTCAGATACATCCTCAGGAGCTGCAATTTCCCTTTGAATTGAAGAAGCAGGTACCATGTTCTTTGCAGTTGTCTAACAATTCAGATAATGTTGTGGCTTTCAAGGTTAAGACTACAAATGCAAAGAATTATTATGTTAGGCCTAATATTGGTCTTGTGTTTCCTAGGTCTACTTGTGATATAATAgTTACAATGCAAGCCCAAAAGGAGGCACCTCTTGACATGCAATGCAAAGATGAATTTGTCATCCAAAGCATAGTTGCAAATCACAAAAGATATCACTCCAAAAATGGAGCAACCACAAAAGATATAACTCCAGAAATGTTTAATAAAGACTCTGGCTATGAGATTGAAGAGTGCAAATTGAGAGTGGTCAATGTTGCTCCTCCTCAACCACCATCCCCGGTTAAAATAGGATCTGATAAAGATTCGAAAGCGTCCAATGAACATGTTGAACAGCAGAATACTTCATTTCAGATACATCCTCAGGAGCTTAAATTTCCCTTTGAATTGAGGAAGCAGATATCATGTTCTTTGCAGCTATCTAACAAGTTCTGA 708 0.3672 MFNKESGYEVEDYKLKVVYVAPPQPASSVREGSDKDSKASNEQVEQWDTSFQIHPQELQFPFELKKQVPCSLQLSNNSDNVVAFKVKTTNAKNYYVRPNIGLVFPRSTCDIIVTMQAQKEAPLDMQCKDEFVIQSIVANHKRYHSKNGATTKDITPEMFNKDSGYEIEECKLRVVNVAPPQPPSPVKIGSDKDSKASNEHVEQQNTSFQIHPQELKFPFELRKQISCSLQLSNKF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-RELATED 208 234 - -
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-RELATED 1 43 - -
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 50 203 IPR016763 GO:0005789
Tsu06g00721 235 MobiDBLite consensus disorder prediction 25 45 - -
Tsu06g00721 235 Gene3D Immunoglobulins 45 181 IPR013783 -
Tsu06g00721 235 ProSiteProfiles Major sperm protein (MSP) domain profile. 50 177 IPR000535 -
Tsu06g00721 235 SUPERFAMILY PapD-like 48 187 IPR008962 -
Tsu06g00721 235 Pfam MSP (Major sperm protein) domain 52 142 IPR000535 -
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-RELATED 50 203 - -
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 43 IPR016763 GO:0005789
Tsu06g00721 235 MobiDBLite consensus disorder prediction 179 205 - -
Tsu06g00721 235 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 208 234 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00721 Tsu-Chr6 6280422 6290896 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00721 - - gmx:100779655 221.861