Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00719 ATGCCGAAACGCACCAAAtcggaagaagaagaagaagagggtACTTCGAATTCAACATCATCGGAATCAGAACAAACTGTACGGAACAGTAGTACCATGTCAGAATACGAGAAACAGAGACTGAAAAGAATTGCAGAAAACCAAGCGAGATTGAAAGCTATGGGGTTACCTCAAATGGTTACTTCATTGAAAAAATCAACTCCGATTAAGAAGAAGAACAAAGGGAAAGaaaaggttgaagatgatgaagagtaTAAACCCGAAAGCGAGGAAGAACGAGAACACGAATCAGATTCAGATTCTTCTAGTGAAGAACAACATGAACATGATTCTGACTTTGAAATTGCTTCTGGGTCACGGAAAAGAAagGCGAAGAACAAAAGTTTGAAGGTGAAAAGTAGAGTAACCGGAAAGAAGCATAGTGGTAATTTAGATTATATTGATAATGAAGACGAAGCTTTGATTCAGGCAATTGCTCTTTCCTTGCAAGATTCTGCAGAAGCTTCATTTTGCTCTAACAAGAATGTAGGGAACATCAGCAAGGCTgggaaaaatgaaaacattCTCATTCAAGAAGATAAGGGaagaaagaagaacaaaaaatcgTTTACTAGTCGGCTGCAAATGACTGAGGATGAACTCATTGTACACTTCTTCCAACTTGATGAAGCAGGAAAAGGAACTGTAACAAAAAGGGATTTAGAAAGAGCAGCTATAGCTCATGATTTTGCATGGACAGACAAAGAGTTGGTTGATATGATCCGCTGTTTTGATAGTGATAGAGATGGAAAGCTAAGCCTTGATGATTTTCGGAAGATTGTTGTACGTTGCAACATGATAAAAGGCTCAGAAAATTCTTGA 861 0.3461 MPKRTKSEEEEEEGTSNSTSSESEQTVRNSSTMSEYEKQRLKRIAENQARLKAMGLPQMVTSLKKSTPIKKKNKGKEKVEDDEEYKPESEEEREHESDSDSSSEEQHEHDSDFEIASGSRKRKAKNKSLKVKSRVTGKKHSGNLDYIDNEDEALIQAIALSLQDSAEASFCSNKNVGNISKAGKNENILIQEDKGRKKNKKSFTSRLQMTEDELIVHFFQLDEAGKGTVTKRDLERAAIAHDFAWTDKELVDMIRCFDSDRDGKLSLDDFRKIVVRCNMIKGSENS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00719 286 MobiDBLite consensus disorder prediction 1 142 - -
Tsu06g00719 286 ProSiteProfiles EF-hand calcium-binding domain profile. 245 280 IPR002048 GO:0005509
Tsu06g00719 286 MobiDBLite consensus disorder prediction 18 34 - -
Tsu06g00719 286 MobiDBLite consensus disorder prediction 122 137 - -
Tsu06g00719 286 Pfam EF-hand domain pair 213 274 IPR002048 GO:0005509
Tsu06g00719 286 SUPERFAMILY EF-hand 199 276 IPR011992 -
Tsu06g00719 286 SMART efh_1 249 277 IPR002048 GO:0005509
Tsu06g00719 286 MobiDBLite consensus disorder prediction 99 121 - -
Tsu06g00719 286 ProSitePatterns EF-hand calcium-binding domain. 258 270 IPR018247 -
Tsu06g00719 286 Gene3D - 164 285 - -
Tsu06g00719 286 MobiDBLite consensus disorder prediction 84 98 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00719 32 283 EF-hand Containing Proteins AT1G73440 41.502 1.23e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00719 - - gmx:100806103 293.123