Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00683 ATGTCGACGATAGCGCGCAGAGGCATCCATTTCATGCAGAGACTGAATTCAGCGAATGTATCTTCTGCTTTACTAGAGAAAGGCCAAAATCGTGTAATCGATGCTTCACTTACCCTGATTAGAGAAAGAGCAAAGCTTAAGGGAGAACTCGTGCGTGCTTTGGGAGGCGCTGTAGCAACTTCATCGCTTCTTGGAGTTCCTTTGGGACATAATTCATCATTCCTTCAAGGGCCTGCATTTGCACCTCCTCGCATTAGGGAGGCTATTTGGTGTGGTAGCACAAACTCGACAACCGAAGAAGGTAAGGATTTACAGGACGCACGGGTGCTAACTGATGTTGGTGATGTCCCTATTCAAGAGATTCGTGATTGTGGCGTAGATGATCATAGATTGATGAATGTCATTAGTGAATCTGTCAAGTTAGTGATGGAAGAGGATCCATTAAGACCTTTAGTTTTAGGTGGCGATCACTCAATATCATTTCCGGTTATTAGAGCCGTCTCTGAAAAGCTTGGAGGACCGGTTGATGTTCTTCATCTTGATGCACATCCTGACAACTATGATGCCTTTGAAGGGAACATTTATTCGCATGCTTCTTCGTTTGCTCGAGTCATGGAGGGTGACTATGTTCGGAGACTCTTGCAGGTTGGTATTCGATCAATAACAACTGAAGGACGTGCACAAGCAAAAAAATTTGGGGTCGAGCAATATGAAATGCGAACATTTTCCAGAGATCGCCACTTCCTAGAGAACCTGAAACTAGGGGAAGGTGTTAAAGGTGTATATATCTCAATAGACGTAGATTGTCTTGATCCTGCCTTTGCTCCAGGAGTGTCTCACATTGAACCAGGAGGTCTTTCATTCCGCGATGTTCTTAACATCCTACAAAATCTTCAAGGCGATGTTGTTGCTGGAGATGTGGTTGAATTCAACCCACAACGCGATACCGTTGATGGAATGACTGCCATGGTAGCTGCTAAGTTGGTGAGAGAATTGGCTGCAAAGATTGCAAAATGA 1017 0.4444 MSTIARRGIHFMQRLNSANVSSALLEKGQNRVIDASLTLIRERAKLKGELVRALGGAVATSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKDLQDARVLTDVGDVPIQEIRDCGVDDHRLMNVISESVKLVMEEDPLRPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDNYDAFEGNIYSHASSFARVMEGDYVRRLLQVGIRSITTEGRAQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILQNLQGDVVAGDVVEFNPQRDTVDGMTAMVAAKLVRELAAKIAK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00683 338 Pfam Arginase family 62 332 IPR006035 GO:0046872
Tsu06g00683 338 PANTHER ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL 4 338 - -
Tsu06g00683 338 ProSiteProfiles Arginase family profile. 52 338 IPR006035 GO:0046872
Tsu06g00683 338 Gene3D Ureohydrolase domain 55 338 - -
Tsu06g00683 338 CDD Agmatinase-like_2 63 333 - -
Tsu06g00683 338 PANTHER ARGINASE/AGMATINASE 4 338 IPR006035 GO:0046872
Tsu06g00683 338 PIRSF Arginase 56 338 IPR006035 GO:0046872
Tsu06g00683 338 SUPERFAMILY Arginase/deacetylase 62 335 IPR023696 -
Tsu06g00683 338 ProSitePatterns Arginase family signature. 264 285 IPR020855 GO:0016813|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00683 Tsu-Chr6 5926552 5930537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00683 K01476 - gmx:100789799 629.787