Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00679 ATGCTACTTTTTCTATCAACAATGGCGATTCCAACAATTTCCCGCGTAAAATTCCTTCCAAAACCATTACTTTTCACATCTCTCCGCAGAATCCAATTCCCGCACAAATATTCTACCCGCACCGTCTCTTGCATACAAAACCAAACTCCAAAACGCAACGGCGATATCGTCGTTTTGGGCATAGAAACTAGCTGCGACGACACTGCCGCCGCTATAGTGAGAAGTGATGGTGAAATTCTGAGTCAGGTGATATCTTCTCAGGCAGATCTGCTTGTGAAGTATGGAGGAGTTGCTCCAAAAATGGCAGAAGAAGCTCACTCACAAGTGATAGACCAGGTTGTGCAAGAAGCCCTTGATAAAGCTTATATGACTGAGAAGGATCTTACCGCGGTTGCTGTTTCTATTGGTCCTGGTTTAAGTCTCTGCCTTCGTGTAGGGGTGCAGAAGGCTCGGAGAATTGCCGGGGGCTTTAATTTACCAATTATTGGCATCCATCACATGGAGGCTCATGCTCTAGTGGCTAGGTTAATTGAGAAAGATTTGCAGTTTCCATTCATGGCCCTACTTATTTCAGGGGGACATAATCTACTCATTCTTGCACGTGATCTTGGTCAATACATACAACTTGGAACTACAATAGATGATGCTATTGGCGAGGCTTATGACAAGTCAGCAAAATGGCTTGGACTTGATTTGAGCAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAGAGAGGGAAATGCTAAATCAGTTAATTTCTCTATTCCAATGAGGCAGCATAAAGATTGCAACTTCTCTTATGCTGGTCTAAAAACCCAAGTAAGACTGGCAATTGAGTCCAAAAAGATTGATGCCAAAATTCCTATTTCTTCTGCAAGTTATGAAGATCGATTGTCTCGGGCTGATATTGCTGCTTCTTTTCAGCAGCGAATTGCAGTGTTACATCTAGAGGAAAGGTGTGAGCGAGCAATAGAGTGGGCATTGAAGATGGAGCCTTCGATAAAACACTTGGTAGTTGTCTCTGGTGGTGTTGCATCAAATCAATATGTTCGGGCACGACTTGATACGGTTGTGAAGAAGAATGGCCTGCAACTTGTATGCCCTCCTCCCTGGCTTTGTACCGACAATGGTGTAATGGTTGCTTGGACTGGTATTGAGCACTTTCGCGTGGGAAGATATGATCCTCCACCTCCTGCAGAAGATCCAGAAGACTACCAGTACGATATACGCCCAAGGTGGCCGTTGGGGGAAGAATATGCTGAAGGAAGAAGTGAAGCTCGCTCCGTAAGAACTGCACGTATTCATCCTTCTCTTACATCTCTAATTCAAGCATCATTGCAACAATGA 1350 0.4452 MLLFLSTMAIPTISRVKFLPKPLLFTSLRRIQFPHKYSTRTVSCIQNQTPKRNGDIVVLGIETSCDDTAAAIVRSDGEILSQVISSQADLLVKYGGVAPKMAEEAHSQVIDQVVQEALDKAYMTEKDLTAVAVSIGPGLSLCLRVGVQKARRIAGGFNLPIIGIHHMEAHALVARLIEKDLQFPFMALLISGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKSAKWLGLDLSRSGGPAIEELAREGNAKSVNFSIPMRQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASYEDRLSRADIAASFQQRIAVLHLEERCERAIEWALKMEPSIKHLVVVSGGVASNQYVRARLDTVVKKNGLQLVCPPPWLCTDNGVMVAWTGIEHFRVGRYDPPPPAEDPEDYQYDIRPRWPLGEEYAEGRSEARSVRTARIHPSLTSLIQASLQQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 339 348 IPR017861 -
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 151 IPR017861 -
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 171 IPR017861 -
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 186 198 IPR017861 -
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 59 72 IPR017861 -
Tsu06g00679 449 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 209 230 IPR017861 -
Tsu06g00679 449 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 56 412 IPR022450 GO:0002949
Tsu06g00679 449 Coils Coil 447 449 - -
Tsu06g00679 449 SUPERFAMILY Actin-like ATPase domain 58 383 IPR043129 -
Tsu06g00679 449 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 59 382 IPR017861 -
Tsu06g00679 449 Gene3D - 58 390 - -
Tsu06g00679 449 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 58 389 IPR022450 GO:0002949
Tsu06g00679 449 Gene3D - 184 369 - -
Tsu06g00679 449 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 55 428 IPR000905 -
Tsu06g00679 449 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 78 383 IPR000905 -
Tsu06g00679 449 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 55 428 IPR022450 GO:0002949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00679 K01409 - gmx:100784367 729.169