Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00671 ATGGAAATTGGGATGCTTCCAATTTCTGCATCAAAGAGAGGAAAACTCTTAGCTGCTGGTTACACTTCACTCCACTCCATTGCCACCACTTCCATCACCCACCTTGCCACagATATAGAAGTTTCTGAGAGTGAAGCTTTGGAAATTCTGAATTTTGCTACAAAAACCAGTGCTTTGGAAAGATCAAGTGGAAGTAACACTAATGTTATTCAAGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAAAGGTTTTCTTCTTCCATTACCACTTCTTGTGTTGATCTGGATAACATCCTTGGTGGAGGCATTAATTGCAAAGAAGTCACTGAAATTGgtggAGTTCCGGGCATCGGTAAAACACAAATAGGGATTCAACTTGCAGTAAATGTTCAGATTCCTCTAGACTATGGTGGTCTAGGTGGGAAGGCAATATACATTGATACAGAAGGAAGCTTTATGGTCGAACGTGTTCTTCAAATTGCTGAAGCATGCATAGAAGATATGTCAGAATATAGCCACCACTTTCACAAGGATAATCAAGCTTATGGAGTTAAAATGCACCCAAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACTGAACAAATTGCTTTGGTAAATTACTTGGACAAATTCGTCACGGAGCATAAAGATGTGAAGATAATCATAATTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGAAGATATGGCTCTTCGGACTCGATTACTTGGTGAAATGTCTTTAAAGTTGATGAAACTTGCAAGAAATTTCTCTTTGGCTGTTGTTATGTTGAATCAAGTTACAACCAAGCATATTGAAGGTTCATTTCAGTTGACACTTGCCCTAGGTGATAGCTGGTCGCATTCATGCACGAACCGGATCATCTTATATTGGAATGGCGATGAACGACATGCATACATCGACAAGTCTCCTTCTCTTAAATCAGCTTCAGCACCATATTCTGTGACTTCTAGAGGGATACGTAATTCTACTTCAAGTAGTAAAAGAATCAAGATGGTATGA 1044 0.3889 MEIGMLPISASKRGKLLAAGYTSLHSIATTSITHLATDIEVSESEALEILNFATKTSALERSSGSNTNVIQGGQTAWDMLNEERFSSSITTSCVDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAYGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFEDMALRTRLLGEMSLKLMKLARNFSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00671 347 CDD Rad51_DMC1_radA 89 335 IPR033925 GO:0003677
Tsu06g00671 347 Gene3D - 69 338 IPR027417 -
Tsu06g00671 347 Gene3D - 14 56 - -
Tsu06g00671 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 335 IPR027417 -
Tsu06g00671 347 PIRSF Rad51 1 340 IPR016467 -
Tsu06g00671 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Tsu06g00671 347 Pfam Rad51 74 336 IPR013632 -
Tsu06g00671 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00671 Tsu-Chr6 5857020 5861154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00671 K10870 - gmx:100527406 542.732