Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00659 ATGTCTGATTGGTCAGCTGAAAATGCCAAGAAGGCTTATCTCCAAGCTCTCAAAATGGCCAAAAGGGACAAAGAACCCGATGTAGCCGAGTTCATATCAGCTATTGCAGCAGGAAAAAATGCACAACTCATGGTTGTAGCCAGTGCCAGCGTGGCAGGTTCTGCCATACTAGCACTGGCTGCAGCCGCTCAACAAACATCCGGTCGTGTGATATGCATCTCACGTGGCCAAAACGAATTACAAGAATCCAAAAAAGCTCTAGGAGTTCATAAAGATTATGTTGAGTTTGTTGTAGGAGATGCTAAAAGTCTTCTCTTAAATGACTACAAAGGAGCTGATTTTGTTCTTGTAGATTGTGACATGTATAATGCAAGAGAAATTTTTCTAGCAGCATTTAAAGGTGCCACCAAAGATGGTTCACTTGTGGTAGGATATAATGTTAGGCATAGGGCCTTGAGATGGAGACAATTGAGAGCAACATATTTACCTATTGGAGAAGGGTTACTTGTGACCAAAGTTGATCTTAATTTGAAGAAGGATAATGAAATTCTTGTTCAAAGAAAGAAGAGTAATTGGATTGTTCAAGTAGATAATTGCACCGGAGAGGAACATATATTTAGGGTCTCGTCTCCGAATAAGAAAGTACAAATTGAAGTTTAA 660 0.3985 MSDWSAENAKKAYLQALKMAKRDKEPDVAEFISAIAAGKNAQLMVVASASVAGSAILALAAAAQQTSGRVICISRGQNELQESKKALGVHKDYVEFVVGDAKSLLLNDYKGADFVLVDCDMYNAREIFLAAFKGATKDGSLVVGYNVRHRALRWRQLRATYLPIGEGLLVTKVDLNLKKDNEILVQRKKSNWIVQVDNCTGEEHIFRVSSPNKKVQIEV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00659 219 Gene3D Vaccinia Virus protein VP39 3 175 IPR029063 -
Tsu06g00659 219 PANTHER DUF1442 FAMILY PROTEIN 1 213 IPR009902 -
Tsu06g00659 219 Pfam Protein of unknown function (DUF1442) 4 207 IPR009902 -
Tsu06g00659 219 PANTHER DUF1442 FAMILY PROTEIN 1 213 - -
Tsu06g00659 219 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 160 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00659 Tsu-Chr6 5744727 5745685 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00659 - - gmx:100783654 308.531