Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00558 ATGGATAGCAGTGAAGATCTGAGATTCTTTGAATTGAACACAGGCGCTAAGATTCCTTCTGTTGGTTTAGGCACTTGGCTTGCTGCACCTGGTGTTGTTTACGATGCAATCTCCACTGCTGTTAATGTTGGATATAGACATATAGATTGTGCTCAAATTTATGGCAATGAAAAAGAGATTGGTGATGccttgaagaagttatttgaTAATGGAGTAGTTAAGCGTGAAGAGATGTGGATTACATCCAAGCTATGGTGTACCGATCATTTGCCAGAAGACGTCCCAAAGGCATTTGATAGGACTTTACGCGATTTGCAGCTGGACTATGTTGATCTCTACCTTATTCACTGGCCAGTGAGCATAAAAAATGGACAGTTAACAAAACCTAACCTACCAAGCACATGGAAAGCAATGGAGGCGCTTTACGATTCAGGCAAGGCTCGAGCTATAGGAGTCAGCAATTTCTCTGTAAAAAAACTTCAGGATCTGTTGGATGTTGCACATGTTCCTCCAGCTGTTAACCAAGTTGAATTGCATCCTTCATTGCAGCAGCCAAACTTACATGCTTTCTGTAAATCCAAGGGAGTGCACTTATCTGGTTATTCGCCACTAGGTAAAGGAGTTGAGAGTAATATTCTTAAAAATCCGGTTCTGCACACGACTGCTGAGAAGTTAGGGAAGACTCCGGCCCAAATAGCCCTTCGATGGGGACTACAAATGGGTCATAGTGTACTTCCAAAGAGCACAAATACTGCGAGGATCAAGGAAAACATTGATCTGTTTGACTGGTCTATACCAGAAGAATTGCTAGCCAACTTCAATGAAATTAAGCAGGAAAGAGTAGTTCCTGGAGAAACATTTGTTAGTGAGACATCTCCTGGGTACAAAACAATTGAAGAACTATGGGATGGCGAGTAA 918 0.4129 MDSSEDLRFFELNTGAKIPSVGLGTWLAAPGVVYDAISTAVNVGYRHIDCAQIYGNEKEIGDALKKLFDNGVVKREEMWITSKLWCTDHLPEDVPKAFDRTLRDLQLDYVDLYLIHWPVSIKNGQLTKPNLPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLDVAHVPPAVNQVELHPSLQQPNLHAFCKSKGVHLSGYSPLGKGVESNILKNPVLHTTAEKLGKTPAQIALRWGLQMGHSVLPKSTNTARIKENIDLFDWSIPEELLANFNEIKQERVVPGETFVSETSPGYKTIEELWDGE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00558 305 SUPERFAMILY NAD(P)-linked oxidoreductase 10 279 IPR036812 -
Tsu06g00558 305 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 6 304 - -
Tsu06g00558 305 Gene3D - 7 305 IPR036812 -
Tsu06g00558 305 ProSitePatterns Aldo/keto reductase family signature 1. 44 61 IPR018170 GO:0016491
Tsu06g00558 305 Pfam Aldo/keto reductase family 32 276 IPR023210 -
Tsu06g00558 305 PIRSF AKR 3 300 IPR020471 GO:0016491
Tsu06g00558 305 PANTHER ALDO/KETO REDUCTASE 6 304 - -
Tsu06g00558 305 ProSitePatterns Aldo/keto reductase family putative active site signature. 245 260 IPR018170 GO:0016491
Tsu06g00558 305 PRINTS Aldo-keto reductase signature 100 118 IPR020471 GO:0016491
Tsu06g00558 305 PRINTS Aldo-keto reductase signature 138 155 IPR020471 GO:0016491
Tsu06g00558 305 PRINTS Aldo-keto reductase signature 212 236 IPR020471 GO:0016491
Tsu06g00558 305 PRINTS Aldo-keto reductase signature 172 201 IPR020471 GO:0016491
Tsu06g00558 305 PRINTS Aldo-keto reductase signature 40 64 IPR020471 GO:0016491
Tsu06g00558 305 CDD AKR_AKR4C1-15 8 282 IPR044498 GO:0016491
Tsu06g00558 305 ProSitePatterns Aldo/keto reductase family signature 2. 138 155 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00558 Tsu-Chr6 4783466 4786696 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00558 K00002 - gmx:100809492 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00558 06 4783466 4786696 Tsu06g00558 06 4783466 4786696 ECH