Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00555 ATGATGAAGAGATTAATGGGTGGACCTGGAACAGTTAGTGGATTCTTATTGCGGTTAGGACAATGTGCATTTGGTGCTGCTTCTATTAGCATCATGGTTACAGCCCCTGGATTCTCTGCCTACACCGCTTTCTGCTATTTAACTGCATCAATGGGACTTCAAGTGCTCTGGAGCTTTGGACTTGCAAGCCTTGATATTTATGCTTTGAGAAGAAAGAGAGACCTACAAAATCCAATTCTTGTTAGCCTGTTTGTCGTAGGCGATTGGGTAACAGCCATTTTGTCACTAGCAGCTGCATGCTCATCAGCAGGAGTCATAGTTTTATATTCGAGAGACTTGGATACGTGTGCAGTTCATAAGACAATCCCTTGCCACAGTTACCAGGTTTCTGTAGCCATGGCTTTCGTCACCTGGGGTCTTACAGCTGTGTCATCACATGTGATGTTTTGGATATTGGCCTCAGTCTAG 468 0.4444 MMKRLMGGPGTVSGFLLRLGQCAFGAASISIMVTAPGFSAYTAFCYLTASMGLQVLWSFGLASLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVIVLYSRDLDTCAVHKTIPCHSYQVSVAMAFVTWGLTAVSSHVMFWILASV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00555 155 PANTHER CASP-LIKE PROTEIN 2 155 - -
Tsu06g00555 155 PANTHER CASP-LIKE PROTEIN 5B3 2 155 IPR045009 -
Tsu06g00555 155 Pfam Casparian strip membrane protein domain 9 139 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00555 Tsu-Chr6 4758911 4764562 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00555 - - gmx:100306188 260.381