Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00553 ATGGTCGTGGCAATGCCACGGCGTCACAAGACGATGCCGGCGGCTGCAACCCTCGGTATCCTTGCCTTTGACGCCGGCAAGACTATGTGCCGCCTCATCTCTCTCTACCACTCCCTCTCCGACGTAGAAGTCACGAAACTCCACCACGAGATCATCAAATCCAAAGGTGTAACATATTTGAATTCCAACCAAAAAGATTTCCTCATCAACCTGGCCGCTGCCGAACGCCTTGAGGAGCTCGACAATACCGCTGCAACCGTCTCCCGTCTAGGCCAAAAGTGTTCTGACTTTGGCCTAGCACATTTCAACCTTGTATATGCCGATCTCAAGCATGGTGTCATTGACCTCGGGAAGCTGCACTACAACTCccgaaaaacccacaaaatcataGACAAATCCGAGAAACTCATTTCCGCAACCGCTAATCTCTACTCTGCCATGGAATACATGGCAGAGTTAGAGGCTGCGGAGAAAAaaagacaacaacaacaacgttgTTGGGACATAACAAAACCATCTTTAAAGCCAAACGTGGAACATTTCAATGAGAAATTAGTGCACCAAAGAAAGCAAGTGCAACATTTCAAGGAAACATCTTTATGGAAACGAACATTCGACAAAACCGTTGGGATCATGGCAAGGCTTGTGTGCATTGTCTACGCAAGAATATGTTCCATTTTCGGAGCATATATTAATACCGAAAAGAATGACAAAAACAATTTCATCCGCTTTGGTTTTGGTTTGGACAATTGTTGCCTTCTGGAACACCGTGAATTGTATCAGAATGCAATTCGCGGTGTTTCAGAATGGTACGACGAATCACTTCCGAAGCGTGGTACGAAGTCCTGCCCAATTTCCAAAGAAGCAGCAACAACTAAAACTGGTCTGCTCAGATTTCTAAATAATCCTATGCCAATGGATTTTGCTTCTTGTGGCGGTGAAATTGAGAAAATGATAAATGGTAATAATGATAGAGTTTTGAAGATGGCGCCGCCATCCACTGTGGGTGGAGTTGGGCTTTCTTTGAGGTATGCTAATGTGATTCTATCGGTGGAGAGTTGTCTCCATGCGCCAGCGACAATAGGAGATGACGCGCGTGAGGCATTGTACGAGATGTTACCGGGGAGGTTAAGGGTGAAGGTAAGGGCGAAGCTGAAGGGACGTTGGGGGAAAGAGGGAGGCGAAGGAATTGACGGGCACAAGCTGGCAGAAGGGTGGCGGGAGGCCGTGGAGGAGTTGATGGAATGGCTGTCACCGATGGCCCACGACACTATCCGGTGGCAGAAGGAGAGGCATCTGGAAAAGACGAAATTCGAGACAAAGCCTACGTCGATGCTTCTGCAGACATTGCATTACTCTGACTTGGAGAAGGCAGAGACTGCCATAGTAGAAGTGTTGGTTGGGTTGAGTTGTATATATTGGTGTGAGAGAAGGGTGTAG 1440 0.4625 MVVAMPRRHKTMPAAATLGILAFDAGKTMCRLISLYHSLSDVEVTKLHHEIIKSKGVTYLNSNQKDFLINLAAAERLEELDNTAATVSRLGQKCSDFGLAHFNLVYADLKHGVIDLGKLHYNSRKTHKIIDKSEKLISATANLYSAMEYMAELEAAEKKRQQQQRCWDITKPSLKPNVEHFNEKLVHQRKQVQHFKETSLWKRTFDKTVGIMARLVCIVYARICSIFGAYINTEKNDKNNFIRFGFGLDNCCLLEHRELYQNAIRGVSEWYDESLPKRGTKSCPISKEAATTKTGLLRFLNNPMPMDFASCGGEIEKMINGNNDRVLKMAPPSTVGGVGLSLRYANVILSVESCLHAPATIGDDAREALYEMLPGRLRVKVRAKLKGRWGKEGGEGIDGHKLAEGWREAVEELMEWLSPMAHDTIRWQKERHLEKTKFETKPTSMLLQTLHYSDLEKAETAIVEVLVGLSCIYWCERRV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00553 479 Pfam Protein of unknown function (DUF668) 334 426 IPR007700 GO:0045927
Tsu06g00553 479 Coils Coil 146 166 - -
Tsu06g00553 479 Pfam Domain of unknown function (DUF3475) 20 75 IPR021864 GO:0045927
Tsu06g00553 479 PANTHER OS10G0380300 PROTEIN 12 478 - -
Tsu06g00553 479 PANTHER BNAC09G50660D PROTEIN 12 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00553 Tsu-Chr6 4737686 4739125 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00553 - - gmx:100796635 546.584