Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00551 ATGGCAACTTCTGTTACAAATGTTGGAGCCATTAACATGGCACAGTTGAGATTGAATGGCTCTAGCAATGGAGTTCCTATGACAAGTTCAGCATTTTTTGGAAAAAGCCTTAAGAAAACCAGTTCATTTATTTCCAGCCAGAAATGTTTGTCTGGTAATTTCAAGGTTTTCGCGCAGGTCGAATATAACGAGGAAAAGCAGACCTCAAAGGACAGATGGGCTGGACTTGCTTATGACACCTCAGATGATCAGCAAGATATCACTAGAGGGAAGGGAAAGGTTGACAGTGTTTTCCAAGCTCCAATGGGATCTGGAACTCACTATGCTATCATGAGTTCTTATGATTATATTAGTGCCGGCCTTCGCCAGTACAAAATGGACAATACAATTGATGGCTTGTATATTGCACCAGCATTTATGGACAAGCTTGTTGTTCATATCACCAAGAACTATCTAAGTTTGCCAAGTGTTAAGATTCCTCTCATTTTGGGAATTTGGGGAGGAAAAGGTCAAGGGAAGTCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAGTCCTATAATGATGAGTGCTGGAGAACTGGAAAGTGGAAATGCCGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCGGCCgacattataaaaaaaggaaagatgTGTTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGAAGACTTGGTGGAACTACTCAATACACAGTCAACAACCAGATGGTAAATGCAACCCTTATGAACATTGCTGACAACCCTACCAATGTTCAACTTCCTGGTATGTACAACAAGGAGGATAATCCTCGCGTCCCTATCATAGTCACTGGTAATGATTTCTCAACATTGTATGCTCCTTTAATTCGTGATGGACGTATGGAAAAATTCTACTGGGCGCCTACTCGTGAGGATCGGATCGGTGTCTGTCAAGGTATTTTCAGGTCAGATGGTGTCCCTAAGGATGACGTTGTCAAGCTTGTTGACACATTCCCTGGACAATCAATTGATTTTTTTGGTGCCTTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAATTGGATTACTGGTATTGGTGTGGAGAGTATTGGGAAAAGACTTGTGAATTCAAAGGAAGGACCTCCAACTTTTGAGCAACCAAAAATGACTATTGACAAGCTACTAGAGTATGGAAATATGCTTGTCCAAGAACAAGAAAATGTAAAGAGAGTTCAGTTAGCTGACAAATATCTCAGTGAGGCAGCTCTTGGTGATGCAAATGATGATGCTATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAACAAGTTGATTTTCCTGTCCAACAAGGTTGCGCTGACCCTTCTGCAGAAAACTATGATCCAACAGCCAGAAGTGACAATGGAAGCTGCACATACAATTTGTAG 1431 0.4158 MATSVTNVGAINMAQLRLNGSSNGVPMTSSAFFGKSLKKTSSFISSQKCLSGNFKVFAQVEYNEEKQTSKDRWAGLAYDTSDDQQDITRGKGKVDSVFQAPMGSGTHYAIMSSYDYISAGLRQYKMDNTIDGLYIAPAFMDKLVVHITKNYLSLPSVKIPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRSDGVPKDDVVKLVDTFPGQSIDFFGALRARVYDDEVRNWITGIGVESIGKRLVNSKEGPPTFEQPKMTIDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANDDAIKTGNFYGQGAQQVDFPVQQGCADPSAENYDPTARSDNGSCTYNL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00551 476 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Tsu06g00551 476 PANTHER - 1 475 IPR044960 -
Tsu06g00551 476 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 475 - -
Tsu06g00551 476 MobiDBLite consensus disorder prediction 451 476 - -
Tsu06g00551 476 MobiDBLite consensus disorder prediction 462 476 - -
Tsu06g00551 476 Gene3D - 125 309 IPR027417 -
Tsu06g00551 476 Gene3D - 310 422 - -
Tsu06g00551 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00551 Tsu-Chr6 4714037 4717908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00551 - - gmx:100795298 840.491