Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00550 ATGTGGGtaatatcatcaacaacaaaGACATCATTTTTATTCAACAATTTCAATTTCCACAAACAGAAGAACCATTTGACTCTTCCAATTCGTCTTCTAATGTCTAATTCAAAAACTGCTAGGGTTTCTGATTCTTCTTCACCTTCTTCTCACGCGTCTCTCAAGCGCGTTGGTACTCATAATGGAAGCTTCCATTGTGATGAAGCTCTTGGTTGCTTCATGATTCGTCTTACTCGCAAGTTCTTCAATGCTGAAATTGTTCGCACTCGTGACCCTCAGGTGTTGGAGGGTCTTGATGCTGTTCTTGATGTTGGAGGTGTGTATGACCCTGCCCGAGATCGGTATGATCATCACCAGAAAGGATTTGAGGAGGTTTTTGGGCATGGTTTCTCCACTAAGTTGAGTAGTGCTGGTCTTGTTTATAAGCATTTTGGAAAGGAGATTATAGCCAATGAACTTAAGGTAGATGAAGAGCACCAAGATGTGAATTACGTATATTTGGCTGTTTACAGGAGCTTCATGGAgGCAATTGATGCCGTAGACAATGGAATCAATCAATACGACACAGACCAGCCTCCAAAATATGTTAACAATACTCATTTATCTTCAAGAGTAGGAAGGTTTAATTTGGATTGGACAGATCCCGATCAGTCATCTGAGAAAGAAAATGAGGCCTTTCATCGTGCCATGGCTCTTGCTGGCAGTGAGTTTCTGGATAGTGTTCGATTTCATATAAACTCTTGGTTACCAGCAAGGTCAATAGTAATGGAGACTGTTGCGGCTAGACAAACTGTTGATCCTTCTGGAGaaattttagttttgaaaaAATTCTGTCCTTGGAAGCTTCACTTATTCGAGCTTGAGGGTGAGTTGAAAATTGACCCACCAATCAAATATGTTCTGTATCAGGATGAGAGAAGCAAATCTTGGAGAGTTCAGGCTGTTTCGGTATCTCCTGATAGATTTGAGAGCCGGAAGGCTCTACCTTCACAGTGGCGAGGTTTAAGGGATGACGTACTGTCAGAGGAAGCTGGCATTCCTGGTTGTGTTTTTGTGCATATGAGTGGATTTATTGGCGGAAACCAAACTTTTGAAGGTGCCTTGGCCATGGCAAAAGCTGCTTTGAAGATTTAG 1134 0.4109 MWVISSTTKTSFLFNNFNFHKQKNHLTLPIRLLMSNSKTARVSDSSSPSSHASLKRVGTHNGSFHCDEALGCFMIRLTRKFFNAEIVRTRDPQVLEGLDAVLDVGGVYDPARDRYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEIIANELKVDEEHQDVNYVYLAVYRSFMEAIDAVDNGINQYDTDQPPKYVNNTHLSSRVGRFNLDWTDPDQSSEKENEAFHRAMALAGSEFLDSVRFHINSWLPARSIVMETVAARQTVDPSGEILVLKKFCPWKLHLFELEGELKIDPPIKYVLYQDERSKSWRVQAVSVSPDRFESRKALPSQWRGLRDDVLSEEAGIPGCVFVHMSGFIGGNQTFEGALAMAKAALKI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00550 377 PANTHER METAL DEPENDENT HYDROLASE - RELATED 39 376 IPR003226 -
Tsu06g00550 377 Pfam Uncharacterised protein family (UPF0160) 57 375 IPR003226 -
Tsu06g00550 377 PANTHER METAL-DEPENDENT PROTEIN HYDROLASE 39 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00550 Tsu-Chr6 4707103 4712261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00550 K25877 - gmx:100800706 615.15