Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00549 ATGAGAATAACATTAGTTTCATTCCTTCTATGCTACTACTTCATATATATAACTCATGCCTCTCCCAATTGTCTTTGGTTTGACGATCAACAAATTTGTGTTTGTCTTGAGGATCAACGATCTTTGTTGCTCCAATTCAAAAACAATCACACATTTAACCCTGTAAATTCTACCAATCTATTGGACTGGAATAATAGCACTGCTTGCTGTTATTGGAGTGGTGTTCAATGTGACTATGAGGGGCATGTTAATTACCTTCACCTTAGTAATCAACTCATCTCTGGTGGATTTAACAATTCAAGTAGCCTTTTTAGTCTCCAAAATCTCGAGTTCCTGGACTTGTCGTATAACAATTTCAATTCTTCCTTTCCATCAGGATTCAGCAAGCTGCAGAAGTTAAAATACTTAGATCTTTCTGGCTCTCATTTTTATGGAACACTTTCCGATTCAATCTCAAACCTCACGCACCTTACCTACCTAGACCTTTCGAATAATGATTTGAGTGGTGCAATTCATTCATCCCTTTTTACACTCCCATCATTGAAGATGATTTACCTTCACAACAACCAATTTAGTAAACTAGATGAATTCTTCAATGTGTCTTCCTTTCTATTAAAATACCTTGATTTAAGTTACAATTATCTATCGGGGCCTTTTCCAATATCTGTCTTCCAACTAAAATCACTCACTTTCCTCGATCTTTCCTTTAACAAGTTTAATGGGTCACTTCACCTGGATAAGTTATTTCTTAAAGGGAATCCAATAAATGTTGAACCTTCTTCCATTCCAAAACTAGAAAATCTAAGATTGGCATCCTGTAACTTGAAAAATTTCCCTAGTTTCTTGATAAACCTATCAACATTGTCCTTTCTAGACCTTTCAAATAACCAGATTCAAGGAGTACTGCCCAATTGGATTTGGAAACTACGAAGTCTTTCAGAACTTAATATTTCACACAATTTTCTCACAGAATTGGAAGGACCTATAACAAATCTAACTTCCATCCCTATATCCACGGTTGATATTCATAACAACCTACTACAAGGACCAATACCCATTTTCGCTCACTTTTCTTCCTATTTGGATTACTCAATGAATAACTTTAGCTCTGTTATCCCACAAGATATTGGTACTTACCTATCTTTCAcatcttttctctctctttcacaaaataatttGCATGGAAGTATCCCTAATTCCTTATGTGATGCTGCATATGAAGTTCTTGATCTTTCCTTCAACAACTTTTCTGGATCAATTCCCTCATGTTTAATGACAATGACCAACTCCCTTAGGGTATTAAATTTGAGGAGGAACAAACTGCAAGGCCAAATACCAGATGAGTTTTCAGCTGGTTGTGCTTTACAAACTTTGAACCTTAATGGAAATTTATTACATGGGCCAGTTCCCAATTCTCTTGCACACTGCTCCGAATTAGAGGTACTAGACATCGGAACAAATCAGATTGATGGTTGCTTTCCATGCTTTCTGCAGAACATACCAACACTCAGTGTCCTTGTACTACGGAACAACAAATTTCATGGTACCTTGCAATGTTCAAAAGCAAAACATCCATGGAAAATGATTCGAATCTTGGACATTGCTTTCAACAATTTTAGTGGTAAACTACCAGGAAAATATTTTAGAACCATGAAAAAAATGAAGCATGACGATGATAATGTTGAACGGGTCTTTATCCATATGGAGTGGTATGAGTTATATTATCAGGATAGTGTGACAGTTATGATTAAAGGTCTAGAAATGGAGTTAGTAAAAATTCTGACAATCTTCACAACAATTGATTTCTCATCCAATCACTTTGAAGGACAAATCCCAGAAGATCTAATGGATTTGAAAGCACTCATTGTTCTCAACTTGTCAAACAATGCTTTCTCTAATGAAATCCCATCAACTATTGGGAATTTGAAACAGCTAGAATCCTTGGATCTCTCAAATAACATTTTGGTTGGTGAAATTCCTATGCAACTTGCAAGCTTATCATTCCTTTCTTATTTGAACCTTTCCTTCAATCATTTGATTGGGAAGATCCCAACAGGTACTCAACTACAATCATTTCAAGCTTCTTCCTTTGAAGGAAATTATGGGCTATATGGTCCTCCCTTGACTGGAACACCAAATGGTACAAGGCCGGATGAGCCGCATCCGCAACCAACATGTGGAAGGTTAGCCTGTTCAATTGACTGGAATTTTTTAAGTGTGGAGCTGGGATTTGTTTTTGGGCTCGGAATCATCATTGGTCCTATCATGTTTTGGAAGCAATGGAGGGTAAGGTACTGGAAATTTGTGGACAAAATTCTTTGTTGGATGTTTTCAAGGATGTATCTTGAATATGCAACTGATAGAGGACAAACATACACAGTTTTAAGGTGGTGA 2394 0.3622 MRITLVSFLLCYYFIYITHASPNCLWFDDQQICVCLEDQRSLLLQFKNNHTFNPVNSTNLLDWNNSTACCYWSGVQCDYEGHVNYLHLSNQLISGGFNNSSSLFSLQNLEFLDLSYNNFNSSFPSGFSKLQKLKYLDLSGSHFYGTLSDSISNLTHLTYLDLSNNDLSGAIHSSLFTLPSLKMIYLHNNQFSKLDEFFNVSSFLLKYLDLSYNYLSGPFPISVFQLKSLTFLDLSFNKFNGSLHLDKLFLKGNPINVEPSSIPKLENLRLASCNLKNFPSFLINLSTLSFLDLSNNQIQGVLPNWIWKLRSLSELNISHNFLTELEGPITNLTSIPISTVDIHNNLLQGPIPIFAHFSSYLDYSMNNFSSVIPQDIGTYLSFTSFLSLSQNNLHGSIPNSLCDAAYEVLDLSFNNFSGSIPSCLMTMTNSLRVLNLRRNKLQGQIPDEFSAGCALQTLNLNGNLLHGPVPNSLAHCSELEVLDIGTNQIDGCFPCFLQNIPTLSVLVLRNNKFHGTLQCSKAKHPWKMIRILDIAFNNFSGKLPGKYFRTMKKMKHDDDNVERVFIHMEWYELYYQDSVTVMIKGLEMELVKILTIFTTIDFSSNHFEGQIPEDLMDLKALIVLNLSNNAFSNEIPSTIGNLKQLESLDLSNNILVGEIPMQLASLSFLSYLNLSFNHLIGKIPTGTQLQSFQASSFEGNYGLYGPPLTGTPNGTRPDEPHPQPTCGRLACSIDWNFLSVELGFVFGLGIIIGPIMFWKQWRVRYWKFVDKILCWMFSRMYLEYATDRGQTYTVLRW 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00549 797 Gene3D Ribonuclease Inhibitor 200 259 IPR032675 -
Tsu06g00549 797 Gene3D Ribonuclease Inhibitor 34 199 IPR032675 -
Tsu06g00549 797 ProSiteProfiles Leucine-rich repeat profile. 311 333 IPR001611 GO:0005515
Tsu06g00549 797 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 32 123 - -
Tsu06g00549 797 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 118 782 - -
Tsu06g00549 797 SUPERFAMILY L domain-like 407 708 - -
Tsu06g00549 797 SUPERFAMILY L domain-like 57 399 - -
Tsu06g00549 797 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
Tsu06g00549 797 Gene3D Ribonuclease Inhibitor 406 717 IPR032675 -
Tsu06g00549 797 Gene3D Ribonuclease Inhibitor 260 405 IPR032675 -
Tsu06g00549 797 Pfam Leucine Rich repeat 154 170 IPR001611 GO:0005515
Tsu06g00549 797 PRINTS Leucine-rich repeat signature 642 655 - -
Tsu06g00549 797 PRINTS Leucine-rich repeat signature 157 170 - -
Tsu06g00549 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 32 123 - -
Tsu06g00549 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 118 782 - -
Tsu06g00549 797 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Tsu06g00549 797 SMART LRR_typ_2 666 689 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 154 178 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 226 251 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 106 129 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 618 642 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 430 452 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 285 308 IPR003591 -
Tsu06g00549 797 SMART LRR_typ_2 309 332 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00549 Tsu-Chr6 4699562 4701955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00549 32 764 Receptor kinase-like Gene Family AT2G33060 38.462 6.01e-133 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00549 - - gmx:100804078 820.461