Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00542 ATGCCTGTAAGAGTAGCATTGGAGAACACCACAACCCCTTCTCACGTTTCAGGTGCAAATTCAAGGCGAAATTCATTTCAATCTTGTTCTCTTCTAAGTGTTGGACAGGCCTTTTCTGGCACGCAAAATGTTTCAAGCCTACAAAAGGATGAAGCATGGAGGGTAAATGTCCGTATACAAGGATGTGACCTTGAGCATGGATATCTATGCGGCACCATGGAAGCTCTTAATGTTCCTATGGCAGACACGCCAGTAGTAACATTCTGGGAAGGGGAGATTGTCGATACCAAGAATTATACTTTCTTCACCGGAAAATGGGAGGCAGCACCAGAGGATGATATAAGGCACTGGACTAAATTTGAATCTTTTGGCCCCCTATTGggCCAAGTAGAGCTGGATGGTGGCAAGTCTGCGGACCTAAGCAACTATCCTTACATATTTATGAGATGGAAGGAGCAGTATTTTGTGAATGTTGGAACTGACTGTGGGTTAACTATTGCTGGATTTTACTACGTTTGTTTCTCATGCAACGATGGCTCTATCAGTGGGTTCTATTACGATCCGAATAGCAGCCCATTTCAGAAGCTTGAGTTGAAAGCCACAAATGATGGAAGATCGggtttctctttttcatcctATGAGCTACAGTAG 651 0.424 MPVRVALENTTTPSHVSGANSRRNSFQSCSLLSVGQAFSGTQNVSSLQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEAAPEDDIRHWTKFESFGPLLGQVELDGGKSADLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCNDGSISGFYYDPNSSPFQKLELKATNDGRSGFSFSSYELQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00542 216 Pfam Vacuolar import and degradation protein 32 200 IPR018618 -
Tsu06g00542 216 MobiDBLite consensus disorder prediction 7 21 - -
Tsu06g00542 216 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 19 216 - -
Tsu06g00542 216 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00542 K23335 - gmx:100796349 410.223