Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00541 ATGGAAGTTTTGCAAAATGGCTTTACAAAGTTTGCAATCACTAAACCTCATGAGATAACTGTACCTCTTACTAATGGAACAACAAATCTCTTTGCTAATGGAACAACAAATCTCCTTAACTTGATAGCTGAAAGTTATGAAGATTTGAGTAACATGGATCCTTCTCGAGCTTTTGTTAACAAGGTTAAGCGCTTAATTGTTAAGGTTGGAACAGCTGTTGTTACTCGAAGTGATGGAAGATTAGCACTGGGCAGACTTGGAGCTCTATGTGAGCAgCTCAAAGAACTAAACCTTCAAGGTTATGAAGTTATATTGGTGACTTCAGGTGCTGTTGGTCTTGGCAGACAAAGACTTCGATATCGCAGATTGGCCAATAGCAGCTTTTCTGATCTTCAAAAGCCACAAGGTGACCTTGATGGAAAAGCATGTGCCGCTGTTGGGCAGAGCAGTCTCATGGCTCTCTATGATACTATGTTTAGCCAGCTGGATGTGACTTCCTCACAACTTCTAGTGAATGATGGGTTTTTTAAGGATGCAGGTTTCAGAAAACAACTATCAGAGACAGTTAGCGCGTTATTAGAGTCAAGGGTCATCCCCATTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTACTGGTATATTTTGGGACAATGACAGTTTGGCTGGTCTATTAGCACTCGAACTTAAAGCTGACCTTCTTGTTTTATTAAGTGATGTTGAGGGCCTTTATAGTGGTCCTCCAAATGACCCAAGCTCAAAATTAATCCATACATATATAAAAGAGAAACATCAAAGCGAAATTACTTTTGGAGACAAATCAAGATTGGGCAGAGGTGGTATGACTGCTAAAGTCAATGCTGCTGTTTGTGCTGCTCATGCTGGTATCCCTGTTATTATAACTAGTGGCTATGCCACAGACAACATCATACGAGTGCTTCAAGGGGAGAAAATAGGTACTGTCTTTCATAGAGATGCACATCTGTGGAAAAACTTAAAGGAAGAGAGCGCACATGAAATGGCAGTTGCAGCACGCAATAGTTCTAGACGCCTTCAGGCCCTAAAATCTGAAGAAAGGAGGACAATATTGCTGGCAGTGGCTGATGCATTGgataaaaaccaaaatatgatAAGGCTTGAGAATGAGGCCGATGTTGCTGATGCTATGGCAGCAGGATATGACAAGTCTCTGATATCACGTTTAACCCTGACACCTGAGAAGATCTCTAGTCTTGCAAAGTCTGTGCGTGTGCTGGCAGATATGGAAGAACCAGTTGGTCAGATTTTGAAGAGAACTGAGCTAGCCGATGAACTCGTCCTGGAGAAGATATCATGTCCTCTGGGTGTCCTCCTGATTATATTTGAGTCCCGACCTGATGCTCTTGTTCAGATAGCAGCGTTGGCAATTCGAAGTGGGAATGGCTTATTACTTAAAGGAGGAAAGGAAGCCCGGAGATCAAATGCGGCCTTACACAAGGTCATTACTTCAGCCATACCAGATACAGTCAGTGGCAAACTTATTGGGCTTGTGACTTCAAGAGATGAAATTCCAGATCTTCTCAAGCTTGATGATGTGATAGATCTTGTGGTCCCTAGAGGCAGTAATAAGCTTGTTTCTCAAATCAAGGCATCAACAAAAATCCCTGTTCTTGGTCATGCTGATGGAATTTGTCATATATATGTTGACAAGTCTGCTAATATTGATATGGCAAAGCAGATAGTTAAGGATGCAAAGACTGATTATCCTGCAGCCTGCAATGCAATGGAGACTCTTCTTGTACACAAGGATCTGTCAAATACTGGTGGACTTAATGAGCTTATCCTTGAACTCCAACGTGAAGGTGTTCAACTGTATGGTGGACCAAAAGCTAGTGCCATGCTAAATATTTCTGAAGCGAGTTCTTTACATCATGAATACAGCTCACTTGCTTGCACAATTGAAGTTGTAGAGGACGTCTTTGCTGCCATTGACCACATAAATAAACATGGAAGTGCTCATACTGAATGCATTGTCACAGAAGACTCTGAAGTAGCTGAGACTTTCTTAAGTCAAGTTGACAgTGCTGCTGTATTCCACAATGCAAGTACTCGGTTTTGTGATGGAGCACGCTTTGGGCTTGGGGCAGAGGTTGGAATAAGTACAAGTCGTATTCATGCTCGAGGTCCTGTAGGTGTTGAGGGGTTGCTGACAAACAAATGGATATTGAGGGGGAGGGGACAAGTGGTAGATGGTGATCGAGAGATCAATTATACTCACAAAGAACAGCCACTCAAAGCACAATAG 2301 0.4189 MEVLQNGFTKFAITKPHEITVPLTNGTTNLFANGTTNLLNLIAESYEDLSNMDPSRAFVNKVKRLIVKVGTAVVTRSDGRLALGRLGALCEQLKELNLQGYEVILVTSGAVGLGRQRLRYRRLANSSFSDLQKPQGDLDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFKDAGFRKQLSETVSALLESRVIPIFNENDAVSTRKAPYEDSTGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPNDPSSKLIHTYIKEKHQSEITFGDKSRLGRGGMTAKVNAAVCAAHAGIPVIITSGYATDNIIRVLQGEKIGTVFHRDAHLWKNLKEESAHEMAVAARNSSRRLQALKSEERRTILLAVADALDKNQNMIRLENEADVADAMAAGYDKSLISRLTLTPEKISSLAKSVRVLADMEEPVGQILKRTELADELVLEKISCPLGVLLIIFESRPDALVQIAALAIRSGNGLLLKGGKEARRSNAALHKVITSAIPDTVSGKLIGLVTSRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKASTKIPVLGHADGICHIYVDKSANIDMAKQIVKDAKTDYPAACNAMETLLVHKDLSNTGGLNELILELQREGVQLYGGPKASAMLNISEASSLHHEYSSLACTIEVVEDVFAAIDHINKHGSAHTECIVTEDSEVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNKWILRGRGQVVDGDREINYTHKEQPLKAQ 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00541 766 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 350 738 IPR000965 GO:0004350|GO:0006561
Tsu06g00541 766 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 560 706 IPR016163 GO:0016620
Tsu06g00541 766 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 38 765 - -
Tsu06g00541 766 PRINTS Glutamate 5-kinase family signature 282 302 IPR001057 GO:0005524|GO:0016301
Tsu06g00541 766 PRINTS Glutamate 5-kinase family signature 100 114 IPR001057 GO:0005524|GO:0016301
Tsu06g00541 766 PRINTS Glutamate 5-kinase family signature 184 205 IPR001057 GO:0005524|GO:0016301
Tsu06g00541 766 PRINTS Glutamate 5-kinase family signature 223 250 IPR001057 GO:0005524|GO:0016301
Tsu06g00541 766 PRINTS Glutamate 5-kinase family signature 144 172 IPR001057 GO:0005524|GO:0016301
Tsu06g00541 766 SUPERFAMILY Carbamate kinase-like 63 328 IPR036393 -
Tsu06g00541 766 ProSitePatterns Glutamate 5-kinase signature. 280 297 IPR019797 GO:0004349|GO:0006561
Tsu06g00541 766 CDD ALDH_F18-19_ProA-GPR 345 743 IPR000965 GO:0004350|GO:0006561
Tsu06g00541 766 Hamap Gamma-glutamyl phosphate reductase [proA]. 342 748 IPR000965 GO:0004350|GO:0006561
Tsu06g00541 766 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 38 765 - -
Tsu06g00541 766 SUPERFAMILY ALDH-like 341 747 IPR016161 GO:0016491
Tsu06g00541 766 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 351 746 IPR016162 GO:0016491
Tsu06g00541 766 CDD AAK_P5CS_ProBA 55 329 IPR041744 -
Tsu06g00541 766 PIRSF P5C_synthetase 13 766 IPR005766 GO:0003824|GO:0006561
Tsu06g00541 766 Hamap Glutamate 5-kinase [proB]. 63 332 IPR005715 GO:0005737|GO:0006561
Tsu06g00541 766 Pfam Aldehyde dehydrogenase family 337 603 IPR015590 GO:0016491
Tsu06g00541 766 TIGRFAM proB: glutamate 5-kinase 63 339 IPR005715 GO:0005737|GO:0006561
Tsu06g00541 766 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 56 765 IPR005766 GO:0003824|GO:0006561
Tsu06g00541 766 Gene3D - 53 335 IPR036393 -
Tsu06g00541 766 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 655 676 IPR020593 GO:0004350|GO:0006561
Tsu06g00541 766 Pfam Amino acid kinase family 63 308 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00541 Tsu-Chr6 4578323 4591961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00541 K12657 - gmx:100797414 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00541 06 4578323 4591961 Tsu06g00541 06 4578323 4591961 ECH