Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00516 ATGGACCTTCGCCGTTGTGATAATCTTCATTATATCAAAACCATCAAAGGTGGTTTGGTTACAAATGTCCTTAATGTGTTTCGTGGGCGACCAAAACTTAAATTCAGAAATATTTCAGATATACATAAACATGAGAACTTCTTGTCTGATAATGATGATGTAGAGGCTGTAAGATCATGTGTTGATGTAATGGAGGAAGGAATAGTGAAAACCGAACCCGATGTTTGGGTAAATGATGCCGATGATGGTGATGTTCAGAGAATCCATAActtggatgatgatgaagatgactgTTTCATTTTAACACTAAGGCAAATTAAAGAAAGTTGTAAAGCAAGGAAGAGAAAACGCTCACAAGGTCTCGACtcttctaaaataaaaattgacgaTCCTTCAAAACACCTGGAAGACAACATGGAGAAGCAGAAAATGGAAGAAGATGATCCTGATTTCATAGAGACCCTTACTAGTTTGAGAACTAAATTGTCAAAGAATGTGAagagcaagaagaagaagaagtgcgTAAAAGACCACCCAATGTCCTCCCAAGAGATTGTGCCAGTTGACCAATCGGAAGAGATACTAGATGGTCAAGAGTTGTCACCCTCTAGTGGAGATTCAGCTGCTCTTGTTGAAGTTAAACTTGAGTGTCCTGATAATGATTGTTTTGTTGGGCCAGATGACTGTTCCGGTTGTGAAAAAAGTAAAGATGCGGAGATAACTCTTGAATGGAATTTGCGGCATGAATTGAATTACAAATGGAAAGACTTTTTTGATCTTATTCCACTACGGGCGGTGAGTCCATCTGGTATGGATATTGTAATAAGTAATTCTGAACTAAGCAGTAACCAACCTACAAACTTTCCGGCAGTGGACTTTGAAGATAACTCTGATATTTTTGACAGTCAACTTGATGATGATGCTGATATACCGGTGTCGCCACCTGAAGTGGCTAGTCCTAAAGACCTCGATATTACAGAACTGGAGTTTAGAAATGATAATACTTTACTTGAAGACTGCAGTAAAGATGTATATACAGCTGGTGCTGAGGTTCAGGATAAGGCCTGCTCCACTATTGAACATGGGCTCAATCCTGATCGATCTCTGGTTTGTCGCTCAGATGATTCAACTGAATATGAGGAGAAGCAATCTTTTGATTCCGTATGTGATGATGACATTGGTGCACTAGTCTTACCACCTAAATTGGTTTCTTTTCAGGCCATTTCGCCATCTTCTCAGGAAAAGCTCTGCAAAGCAATGGAGTCCGTTGATATCAGTCATAAAAACAGTCTTAAACGCAAAGAAGCACCGCAACTTACTGAACAAACTGATAAGAATGGTGATGCTGAAGGGCTTAATGATATCACGAGAACTCAAGTTATTAATAGccctaaaaaaattagagttattCCTCCTAAGCCTTCTAAAAGTAGTTCGAATCTTAAGGGCATTCCCAAGAGTCGCAATTCTTCTCGCTCAGCAACCCATGTGGGGTGCAGCACTTTACAGAATTGCTCAAAGAGTGCTATTGCATTTTCAAAGCAGCAGATGAATGATGCAGAATGTCTTGCTATGAAACTCACAAAAGAGTTGAAGTCAATGAAGGATATTATGGATGCTATGTTACGATCTGAGTTCTGTCTTAATACCTCTTTGAGATATAAAGTAAACGAGgcGAGAATGGCTGTCAAAAGTGCGACAAAAGCTGAAGAAGGTGCAAAACGGTGGCTGTCCTTCATGTCAAGGGATTGCAACCGTTTCTGTAAAATAATGAAATTAGCTGAGAGTAGTAGTCCTTCAACTCCACAAGATGCAATCTCACCTCCGAAAGAAGTAGTGcgtaaagagaaaaaaatagcaTTCGCTGATGAAGCAGGTGGAAGGCTGTGCCAGATTGAATCTGGTGTGAAGCTTTGTGTAAGGGGAATTGGACTAGATTTATGCACACCATTGAAGTATCAAGGAGGTTCCGATAATTGGAAGGTGAGGTGTGAATGTGGATCACAAGACAGTTCTTGA 2019 0.3799 MDLRRCDNLHYIKTIKGGLVTNVLNVFRGRPKLKFRNISDIHKHENFLSDNDDVEAVRSCVDVMEEGIVKTEPDVWVNDADDGDVQRIHNLDDDEDDCFILTLRQIKESCKARKRKRSQGLDSSKIKIDDPSKHLEDNMEKQKMEEDDPDFIETLTSLRTKLSKNVKSKKKKKCVKDHPMSSQEIVPVDQSEEILDGQELSPSSGDSAALVEVKLECPDNDCFVGPDDCSGCEKSKDAEITLEWNLRHELNYKWKDFFDLIPLRAVSPSGMDIVISNSELSSNQPTNFPAVDFEDNSDIFDSQLDDDADIPVSPPEVASPKDLDITELEFRNDNTLLEDCSKDVYTAGAEVQDKACSTIEHGLNPDRSLVCRSDDSTEYEEKQSFDSVCDDDIGALVLPPKLVSFQAISPSSQEKLCKAMESVDISHKNSLKRKEAPQLTEQTDKNGDAEGLNDITRTQVINSPKKIRVIPPKPSKSSSNLKGIPKSRNSSRSATHVGCSTLQNCSKSAIAFSKQQMNDAECLAMKLTKELKSMKDIMDAMLRSEFCLNTSLRYKVNEARMAVKSATKAEEGAKRWLSFMSRDCNRFCKIMKLAESSSPSTPQDAISPPKEVVRKEKKIAFADEAGGRLCQIESGVKLCVRGIGLDLCTPLKYQGGSDNWKVRCECGSQDSS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00516 672 MobiDBLite consensus disorder prediction 468 495 - -
Tsu06g00516 672 MobiDBLite consensus disorder prediction 427 451 - -
Tsu06g00516 672 MobiDBLite consensus disorder prediction 427 452 - -
Tsu06g00516 672 MobiDBLite consensus disorder prediction 120 146 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 1 217 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 406 632 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 1 217 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 406 632 - -
Tsu06g00516 672 Coils Coil 510 537 - -
Tsu06g00516 672 MobiDBLite consensus disorder prediction 473 495 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 190 334 - -
Tsu06g00516 672 PANTHER EXPRESSED PROTEIN 190 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00516 Tsu-Chr6 4326689 4331954 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00516 - - lja:Lj0g3v0112609.1 576.244