Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00505 ATGTCGTCCGGCGGCCCAACAACAACCTCGTCAAACACAAGCCCAAGGGTCACAACGGGTCCCACAACAACACGTAGACGCGTAGCCGACAATAACAACAACGATAcagaaaaacaacaacaacaacaacaaaatcaaaacattccACAAAGTTTCTCAGATTTCTCCGAACTAGAACAAGACGACACCGTTTCATCATTAAACCCAATTCACCACCACGCGCATGTTCATCATCACTTACATCCAATCACGCGCTACCTTCTCTTACGCGCTCGCATTTTATTATACGTTCCTGAATCATTCATATTAAGATTGGAACATTTGTTTTTATGGTTATCCGGTTCGGTTCAGTGTATCCGGTCTGGTAAAAATGTGGGCCGTAAGATCTTTGCGATATTAATCTTAATGGTTGTTATGTCGGTTTTTTTTAAGGTTTCGTTTATTGGTGCTGGTGTTGAAATGAATGGTAAAAGTATTGAAAATGGTCAATTGATTTTACAACGGTTTAAAGAAGATTGGGCTTCTGCTCAAAGAGTTGTTACTGAAAATAATGATCAGGTTGAAACTTCCATGCCTAAAAGAGTCCTCGAGAGGTTGGCTACTCCAGAAATATGGATGAAGCCAAACAGTGACAACTATTATCAGTGTGTGTCAAGAAATAGGAATCAAATGAgacCAAAGTCAAAAACTAACGGCTATCTTCTTGTTCATGCAAATGGTGGATTGAACCAAATGAGAACAGGGATATGTGATATGGTTGCAGTGGCAAAAATAATGAATGCCACACTTGTTCTTCCTTCTCTTGACCATGATTCATTTTGGACTGATccaagTGActttaaagatatttttgatTGGAGGCACTTCATGAAAGTTTTGAAAGACGACATTGATATAATCGAGTATTTGCCTGTCCGTTATGCATCTATCAAACCTCTTGTAAAGGCCCCGGTTTCATGGTCAAAGGCTAGTTACTACAGAAGTGAGATTCTTCCATTGTTGAAGAGACATAAGGTTGTACAATTTACTCATACAGATTCAAGACTTGCCAACAATGGTCTTGCTTCATCGATTCAGAAGCTGAGATGTCGTGCTAATTACCAAGCTCTTAAGTATACAGTTGAGATTGAGGAGCTTGGAAAGACTTTGGTTGATAGGCTAAGAAACAATGATGAGCCTTTTATTGCCCTTCATTTAAGATATGAGAAAGACATGCTGGCTTTTACTGGCTGTAGCCATAATCTTACTAAAGCGGAAGCCGAGGAACTAAGGGTTATGAGGTATGAAGTGAAGCATTGGAAAGAAAAAGAGATTGACAGTGTCGAACGGCGATTGCAAGGAGGATGCCCTATGTCACCTAGAGAAGCAGCCATTTTCCTCAAGGCCATGGGGTACCCTTCAACTACAACAATCTACATTGTTGCAGGACCTATTTATGGTAGCAATAGTATGGCAGCCTTTCGCGCCGAGTATCCTAATGTCTTCACTCATTCCACTCTCGCAACTGAGGAGGAGCTAGAGCCCTTCAAGCCGTATCAAAATCGTCTCGCTGCTTTGGATTACATTGTTGCGCTTGAAAGTGATGTATTTGTTTATACTTATGATGGAAACATGGCCAAGGCGGTGCAGGGCCATAGGAGGTTTGAAGGATTTCGGAAAACTATCAATCCTGATAGATCAAATTTTGTCAGGCTGATTGATAATCTAGATATGGGTTCAATATCTTGGGAAGCATTTTCCTCAGAAGTTAAAAATTTGCATTCCAATCGACTAGGTGCGCCTTATCTTAGACAAGTAGGAGAGTCGCCAAGAATCGAAGAGAATTTTTTCGCAAACCCTTTTCCTGGTTGTGTATGCAACAAGTCACAAGAGCAAATTACAAGTCAAAAACTAGACCAAAGATTTGGTATTGGAGCACAAAAATGA 1926 0.3941 MSSGGPTTTSSNTSPRVTTGPTTTRRRVADNNNNDTEKQQQQQQNQNIPQSFSDFSELEQDDTVSSLNPIHHHAHVHHHLHPITRYLLLRARILLYVPESFILRLEHLFLWLSGSVQCIRSGKNVGRKIFAILILMVVMSVFFKVSFIGAGVEMNGKSIENGQLILQRFKEDWASAQRVVTENNDQVETSMPKRVLERLATPEIWMKPNSDNYYQCVSRNRNQMRPKSKTNGYLLVHANGGLNQMRTGICDMVAVAKIMNATLVLPSLDHDSFWTDPSDFKDIFDWRHFMKVLKDDIDIIEYLPVRYASIKPLVKAPVSWSKASYYRSEILPLLKRHKVVQFTHTDSRLANNGLASSIQKLRCRANYQALKYTVEIEELGKTLVDRLRNNDEPFIALHLRYEKDMLAFTGCSHNLTKAEAEELRVMRYEVKHWKEKEIDSVERRLQGGCPMSPREAAIFLKAMGYPSTTTIYIVAGPIYGSNSMAAFRAEYPNVFTHSTLATEEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRSNFVRLIDNLDMGSISWEAFSSEVKNLHSNRLGAPYLRQVGESPRIEENFFANPFPGCVCNKSQEQITSQKLDQRFGIGAQK 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00505 641 PANTHER BNAA04G21750D PROTEIN 114 628 - -
Tsu06g00505 641 CDD O-FucT_plant 233 554 IPR024709 -
Tsu06g00505 641 Pfam GDP-fucose protein O-fucosyltransferase 233 548 IPR019378 -
Tsu06g00505 641 PANTHER OS02G0726500 PROTEIN-RELATED 114 628 - -
Tsu06g00505 641 Gene3D - 359 558 - -
Tsu06g00505 641 MobiDBLite consensus disorder prediction 1 48 - -
Tsu06g00505 641 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00505 Tsu-Chr6 4230009 4235261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00505 85 641 Miscellaneous Gene Families AT2G37980 69.681 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00505 - - gmx:100798057 1037.71