Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00502 ATGTCTTCTTcatcaattcttcatcatcatcttctccttcttccaaACTCACTTCAAAAACCCCAAAAAACCCTTTCCAAATTcaacacaacaacaacctcaaaacGACACATCAAAACCCCAAAAGTCTCTTCCACAACAACAGAATCACAATCCACAACCTCAAAACGACGAAACATAAAAAGCAACCAACCTCAAAACGACATAACAGAACCCCAAAACGAAGAATCAGATTTAGAAGATTACGATGACGGAATCGATTTCCCATACCAGGAACCACCTTTAGTATGTTGTTTTGGAGCAGCACAGAGGGAATTTCTTCCTACTGTGCGTGTGCAGGAGTTTCCAATGCACCCTGATATTTACTCAGAATGGAAAATGTTACAATGGAAGCCGCCGGAGTTCGCTCGAGCACCTGGTGGGCCACCGTCGAATGTGGCAGTGGCCCATGTTAGGCTAGGTGGACGGGCAGCTTTGTTGGGGAAAGTTGGGGATGATGAGTTTGGGGAAGATATTGTTTTGGGGTTGAATAAGGAGAAAGTGCAGACTAGAGGAGTGAAATTCGATTCCGGGTTTAGAACTGGGTGTAGTTATATGAAGTTGAAGTTTGAAGATGGGAAGATGAAGATGGAAACTGTTAGAGAATCTGCTGAGGATTCTCTTCGTATTGATGAATTGAATCTTGCTGTTCTAAAAgagGCGAGGGTTTTCCATTTCAATTCAGAAGTTCTAACGTCTCCTTCTATGGAATCAACTCTCTACAAAGCAATTAAGTGGTTTAAAAAGTTTGGCGGCCTTGTGTTTTTCGATTTAAACTTGCCATTACCACTGTGGAGATCACGTGATGAGACTCGAGAAATAATCAGAAAATCATGGGAAGAAGCAGACATCATTGAAGTGTCAAGAACCGAGCTAGAATTCCTTCTAGACGAAGAACATTACATGAGGAAGAGAAATTATAGGCCACAATACTACGCTGAAGATTACGAACACACCAAGAATCGTCAAGAGTATTACCATTACACTGCCGAGGAAATTGCGCCTTTGTGGCATGATAAACTTAAGTTCCTGTTTGTGACTGATGGAACACTTAGAATTCACTATTACACCCCTTCTTTTGACGGGGTTGTGGTTGGGACAGAAGACGTGCTCATAACTCCATATACTTGTGATAGAACCGGCTCGGGCGACGCGATTGTGGCTGCTATTATGAGAAAACTAACCACTTGCCCGGAAATGTTCGATAACCAAGATGTTTTGGACAGACAGCTACGTTTCGTTGTTGCGGCTGGAATTATATCGCAATGGACTATTGGTGCAGTTAGAGGTTTTCCTACTGAAAATGCTGCTCAGAATCTGAAAGAACAAGTTTGGGTACCTTCTATGTGGTGA 1392 0.4066 MSSSSILHHHLLLLPNSLQKPQKTLSKFNTTTTSKRHIKTPKVSSTTTESQSTTSKRRNIKSNQPQNDITEPQNEESDLEDYDDGIDFPYQEPPLVCCFGAAQREFLPTVRVQEFPMHPDIYSEWKMLQWKPPEFARAPGGPPSNVAVAHVRLGGRAALLGKVGDDEFGEDIVLGLNKEKVQTRGVKFDSGFRTGCSYMKLKFEDGKMKMETVRESAEDSLRIDELNLAVLKEARVFHFNSEVLTSPSMESTLYKAIKWFKKFGGLVFFDLNLPLPLWRSRDETREIIRKSWEEADIIEVSRTELEFLLDEEHYMRKRNYRPQYYAEDYEHTKNRQEYYHYTAEEIAPLWHDKLKFLFVTDGTLRIHYYTPSFDGVVVGTEDVLITPYTCDRTGSGDAIVAAIMRKLTTCPEMFDNQDVLDRQLRFVVAAGIISQWTIGAVRGFPTENAAQNLKEQVWVPSMW 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00502 463 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 140 164 IPR002173 GO:0016773
Tsu06g00502 463 PANTHER FRUCTOKINASE-LIKE 1, CHLOROPLASTIC 48 461 - -
Tsu06g00502 463 MobiDBLite consensus disorder prediction 26 85 - -
Tsu06g00502 463 Pfam pfkB family carbohydrate kinase 119 434 IPR011611 -
Tsu06g00502 463 Gene3D - 96 458 IPR029056 -
Tsu06g00502 463 CDD bac_FRK 95 441 - -
Tsu06g00502 463 SUPERFAMILY Ribokinase-like 130 448 IPR029056 -
Tsu06g00502 463 MobiDBLite consensus disorder prediction 26 72 - -
Tsu06g00502 463 PANTHER HEXOKINASE FAMILY MEMBER 48 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00502 Tsu-Chr6 4209460 4212746 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00502 - - gmx:100819388 713.761