Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00500 ATGGGTATGGTATTTGGCAAAATTGGTGTTGAGACACCAAAATATGAAGTGATCAAAACCACAGAAGACTATGAAATCAGAAAATATGCACCTTCTGTTGCAGCTGAAGTTACCTATGATCCATCACAGTTCAAAGACAACAAAGATGGTGGCTTTATGGTTTTAGCAAACTATATTGGAGCTTTAGGGAACCCTCAAAACACAAAACCTGAAAAGATTGCTATGACTGCACCAGTTATAACAAAGGATGCTGGAGAAAAGATAGCCATGACAGCACCAGTAGTGACCAAAAGTGGCGGCAGCGAAGacgagaagaagaataagatgGTGACTATGCAGTTTATTTTACCAGCTAGTTATGCAAAAGCTGAGGAAGCACCTAAGCCAATTGATGAGAGGGTTGTGATAAGAGAAGAAGGTGAGAGGAAATATGGAGTGGTGAAGTTTGGAGGTGTGGCAAGTGATGAAGTTGTGAAGGAGAAGGTGGAGAAGTTGAAGTTGAGTTTGGAAAGAGATGGATTTAAGGTTGTTGGGGATTTCTTGTTGGGTAGGTATAATCCACCTTGGACAATTCCAATGTTTAGGACTAATGAAGTTATGATTCCTGTTGAATGA 615 0.3919 MGMVFGKIGVETPKYEVIKTTEDYEIRKYAPSVAAEVTYDPSQFKDNKDGGFMVLANYIGALGNPQNTKPEKIAMTAPVITKDAGEKIAMTAPVVTKSGGSEDEKKNKMVTMQFILPASYAKAEEAPKPIDERVVIREEGERKYGVVKFGGVASDEVVKEKVEKLKLSLERDGFKVVGDFLLGRYNPPWTIPMFRTNEVMIPVE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00500 204 SUPERFAMILY Probable bacterial effector-binding domain 3 81 IPR011256 -
Tsu06g00500 204 PANTHER - 2 204 - -
Tsu06g00500 204 SUPERFAMILY Probable bacterial effector-binding domain 84 204 IPR011256 -
Tsu06g00500 204 PANTHER HEME-BINDING PROTEIN-RELATED 2 204 IPR006917 -
Tsu06g00500 204 Gene3D Regulatory factor, effector binding domain 9 82 IPR011256 -
Tsu06g00500 204 Gene3D Regulatory factor, effector binding domain 83 204 IPR011256 -
Tsu06g00500 204 Pfam SOUL heme-binding protein 10 81 IPR006917 -
Tsu06g00500 204 Pfam SOUL heme-binding protein 84 202 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00500 Tsu-Chr6 4204110 4204944 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00500 - - var:108347054 352.829