Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00472 ATGAGAATTACATTAGTTTCATTTCTTCTCAGCTGCTGCAGCATATATATCACTCATACATCTCCTGAATGTCTTGAGGATCAACAATCATTGTTGCTCCAATTAAAGAACAATTTCACATTTCTTGATAAAAAACCATTATATTCTCCAATCATCGATGAAATAATTAGTCCCTCCACCAAACTAAGAACGTGGAATAAAAGAACTGCTTGCTGCAATTGGAGCGGTGTTACCTGTGACAATGACGGACATGTTATTAGCCTTGACCTTAGTGGAGAACATATCGTTGGCGGATTTAACAATTCAAGTAGTCTTTTTAATCTTGTACATCTCCAGAAACTGAACTTGGATGACAACAATTTCAATTCTTCCATTCCATCAGGATTCAGCAAGTTGGAGAGGTTGACTTATCTGAATTTGTCAATGGCTGGTTTTGTGGGACACATTCCAATGGAGATTTCACAGCTTACAAGGTTGGTAACTCTTGATCTCTCTTTCATTTCCCATTCAACAAAATCTCAAATCCCAAATCTGCCAAAGCTTGTCCAAAATCTAACCAAAATTGGGAAATTGTATCTAGATGATATAAGTATAATATCTCAGGGACCTGAATGGAGCAGCGCTTTGTTGCCGTTGCGTGACCTGCAAGAGTTGAGCATGTATAACTGTGATCTTTCAGGACCCCTTGATTCTTCCCTAGCAAAACTAGAAAATCTTTCGGTCATTATTCTTGATGGCAACAATTTTTCATCCCCAATTCCAGAAAACTTTGCAAGTTTAAAACACCTTACCACCCTCGGTCTTTCAGATTGTGGATTGAATGGAACATTTCCACAAAAGATGTTTCAGATTGAAACATTGAGAATTCTTGACATATCATTCAACTTAAATCTTCAGGGTTCATTTCCAGAATTTGCATTGAGTGGATCTATCCATACTTTGTTGGTAAGTTTCACTAGCTTCTCGGGAGAAATTCCGCGCACTATTGGTAACATGAGAAACATATTTGAATTGGATCTTTATCACTGTCAATTTTATGGAACACTTCCCAATTCAATGTCCAACCTCACACACCTTACCTTCCTACAAATTTCTCATAATTATTTAAGTGGTACAGTTCCTTCATTCCTTTTTTCACTCCCAGCCTTAGAGGAGATTGATCTTTCATTCAACCAGTTTAGTAAATTTGACGAATCCATAAATGTTTCTTCTTCTATATTgaaagtaatttttttgaatgacaataATATATCAGGGCATTTACCAATGCCTATCTTTCAAATTCGTTCACTTCTTGTCCTCTGGCTTTCCTCTAATAGGTTGGATGGTTCACTACAACTAGATGCGATTTCGGAACTTAGAAATTTAATTGCACTATCCCTTTCACGGAACAACCTATCATTAAATGTGAATCTTGCAAATGTAAGTCATATTTACCTTCCCAATATTAGGTATTTTGATTTGGCATCCTGCAACTTGAAAACTTTCCCTAACTTCTTGCTAAATCAATCAACATTGACCTTTCTTGACCTTTCAGACAACCAATTTCAAGGAAAAATACCAAAATGTATCTGGAAACTACAATATCTTCATATCCTTAATATTTCTCATAATTTTCTCTCGGTTTTGGAAGAACCTTTGGAAAATATCACTTCCAACTTGAGATATCTTGATATTTCGTTCAACAACATTTATGGAACAATATCACCATCTTTAATCACAATGTTTAGTAACCTTGAGGCAATATATTTAATGAATAACAATCTCAATGGTGTTATACCAGATAGTTTTCTGACTTCTTGTTCCTTAAGATCTTTGAACTTCCATGGAAATCTCTTACATGGGCCAATTCCAAAGTCTCTATCCCACTGCTCATCATTAGAGGTATTGGACGTTGGATCGAATCAAATTTTTGGTGGCTTTCCATgctttttgaaaaatataccGACACTTAGTGTCTTGATTTTGCGGAACAATAGATTGCATGGTTCCATAGAATGTTCACATTCTTTAGAAAATAAGCCTTGGAAAAACATTCAAATTGTGGACATTGCTTTCAACAATTTCAATGGAAAACTACAAGAAAAATACTTCACAACATGGGAAAAAATGATGCACGATGAAGATCACGTTGTACCGAAATTCATTCAGAGAAGTTCAATATACCTTTCTTATAAGGACAGTGTGACAGTTTCTACTAAGGGTCAACAGGTAGAGTTGGttaaaattctaacaatatttACGGCCATTGATTTCTCATCCAATCACTTTGAAGGACCAATACCAGAGGTGCTGATGGACTTCAAAGCAATCCATGTTCTCAACTTTTCAAATAATGCTCTCTCCGGTGAAATCCCATCAACTATCGGGAACTTGAAACAATTAGAGTCATTGGACCTCTCAAATAATTCATTGGTTGGTGAAATTCCTGTGCAGATTGCAAGTTTGTCCTTCCTTTCTTATTTGAATCTCTCGTTTAATCATTTGGTGGGGAAGATTCCAACAGGTACCCAACTTCAGTCATTTGAAGCATCTTCCTTTGAAGGAAATGATGGGTTATATGGTCCTCCATTGACTGAAAAACCAGATGGTAAAAGGCAGGACTTGCTTCCACATCCAGCATGTGGAAGACTAGATTGTTCAAATGATCAGAACTTTTTATGTGTGGAATTGGGATTTGTTTTTGGGCTCGGGATCATCATCGGTCCTATCATGTTTTGGAAACAATGGAGGTTTGATAATTCAAGTGTGGCTTCTGACCTGAAGGTCTGTGCTTCTGATGCAGTAAGTCTAGGTTCTGACCTCCTGGATTCTGAATTCGTAGATGCTGTCGAGTCATGA 2841 0.3622 MRITLVSFLLSCCSIYITHTSPECLEDQQSLLLQLKNNFTFLDKKPLYSPIIDEIISPSTKLRTWNKRTACCNWSGVTCDNDGHVISLDLSGEHIVGGFNNSSSLFNLVHLQKLNLDDNNFNSSIPSGFSKLERLTYLNLSMAGFVGHIPMEISQLTRLVTLDLSFISHSTKSQIPNLPKLVQNLTKIGKLYLDDISIISQGPEWSSALLPLRDLQELSMYNCDLSGPLDSSLAKLENLSVIILDGNNFSSPIPENFASLKHLTTLGLSDCGLNGTFPQKMFQIETLRILDISFNLNLQGSFPEFALSGSIHTLLVSFTSFSGEIPRTIGNMRNIFELDLYHCQFYGTLPNSMSNLTHLTFLQISHNYLSGTVPSFLFSLPALEEIDLSFNQFSKFDESINVSSSILKVIFLNDNNISGHLPMPIFQIRSLLVLWLSSNRLDGSLQLDAISELRNLIALSLSRNNLSLNVNLANVSHIYLPNIRYFDLASCNLKTFPNFLLNQSTLTFLDLSDNQFQGKIPKCIWKLQYLHILNISHNFLSVLEEPLENITSNLRYLDISFNNIYGTISPSLITMFSNLEAIYLMNNNLNGVIPDSFLTSCSLRSLNFHGNLLHGPIPKSLSHCSSLEVLDVGSNQIFGGFPCFLKNIPTLSVLILRNNRLHGSIECSHSLENKPWKNIQIVDIAFNNFNGKLQEKYFTTWEKMMHDEDHVVPKFIQRSSIYLSYKDSVTVSTKGQQVELVKILTIFTAIDFSSNHFEGPIPEVLMDFKAIHVLNFSNNALSGEIPSTIGNLKQLESLDLSNNSLVGEIPVQIASLSFLSYLNLSFNHLVGKIPTGTQLQSFEASSFEGNDGLYGPPLTEKPDGKRQDLLPHPACGRLDCSNDQNFLCVELGFVFGLGIIIGPIMFWKQWRFDNSSVASDLKVCASDAVSLGSDLLDSEFVDAVES 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00472 946 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 552 914 - -
Tsu06g00472 946 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 552 914 - -
Tsu06g00472 946 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 15 559 - -
Tsu06g00472 946 PRINTS Leucine-rich repeat signature 506 519 - -
Tsu06g00472 946 PRINTS Leucine-rich repeat signature 792 805 - -
Tsu06g00472 946 SUPERFAMILY L domain-like 407 598 - -
Tsu06g00472 946 Pfam Leucine rich repeat 577 637 IPR001611 GO:0005515
Tsu06g00472 946 Gene3D Ribonuclease Inhibitor 203 307 IPR032675 -
Tsu06g00472 946 SMART LRR_typ_2 380 403 IPR003591 -
Tsu06g00472 946 SMART LRR_typ_2 236 259 IPR003591 -
Tsu06g00472 946 SMART LRR_typ_2 108 131 IPR003591 -
Tsu06g00472 946 SMART LRR_typ_2 792 816 IPR003591 -
Tsu06g00472 946 SMART LRR_typ_2 480 503 IPR003591 -
Tsu06g00472 946 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 15 559 - -
Tsu06g00472 946 Gene3D Ribonuclease Inhibitor 24 202 IPR032675 -
Tsu06g00472 946 Gene3D Ribonuclease Inhibitor 446 868 IPR032675 -
Tsu06g00472 946 SUPERFAMILY L domain-like 51 397 - -
Tsu06g00472 946 Gene3D Ribonuclease Inhibitor 308 405 IPR032675 -
Tsu06g00472 946 SUPERFAMILY L domain-like 551 858 - -
Tsu06g00472 946 Pfam Leucine rich repeat N-terminal domain 26 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00472 Tsu-Chr6 4040576 4044616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00472 3 910 Receptor kinase-like Gene Family AT1G47890 32.782 1.16e-134 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00472 - - mtr:MTR_4g019010 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00472 06 4040576 4044616 Tsu06g00472 06 4040576 4044616 ECH