Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00445 ATGGCATCTCAACAAAACCGAAAAGAACTTGATGAGAAGGCAAAGCAAGGAGAGACTGTTGTTCCTGGTGGTACCGGAGGCAAGAGCCTTGAGGCTCAGGAACATCTTGCTGAAGGGAGGAGCAAAGGAGGGCAGACAAGGAAGGAGCAGCTTGGAACTGAAGGGTATCAGCAGATGGGTCGTAAAGGTGGACTGAGCACTATGGATAAGTCAGGAGAAGAACGTGCTGAAGAGGAAGGTATTGACATTGATGAGTCCAAGTTCAAGACTGGTTCTGGTAGGAACCAGAACAAGTGA 297 0.4882 MASQQNRKELDEKAKQGETVVPGGTGGKSLEAQEHLAEGRSKGGQTRKEQLGTEGYQQMGRKGGLSTMDKSGEERAEEEGIDIDESKFKTGSGRNQNK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00445 98 MobiDBLite consensus disorder prediction 67 91 - -
Tsu06g00445 98 PANTHER EM-LIKE PROTEIN GEA1 1 97 IPR000389 -
Tsu06g00445 98 Pfam Small hydrophilic plant seed protein 2 53 IPR038956 -
Tsu06g00445 98 MobiDBLite consensus disorder prediction 33 47 - -
Tsu06g00445 98 MobiDBLite consensus disorder prediction 1 16 - -
Tsu06g00445 98 ProSitePatterns Small hydrophilic plant seed proteins signature. 17 25 IPR022377 -
Tsu06g00445 98 MobiDBLite consensus disorder prediction 1 98 - -
Tsu06g00445 98 PANTHER PROTEIN SLE3 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00445 Tsu-Chr6 3791117 3791520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00445 - - gmx:547493 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00445 06 3791117 3791520 Tsu06g00445 06 3791117 3791520 ECH