Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00421 ATGGGAGATTTCAACTTAGCACTAGTAATCGTAGCGATCGTGGTATGTATCATCGTCTTCATCTTCAATGTCTACCTTCTTGTTAACTACCAACACCCCGATGACGTTAATCAAGCTTACTTCCCCAAATTCGTCGTCGTTTTGGGTCTCTCCGTTGCCGCCATTTCAATTCTCATGCTCCCCGCCGATGTGGCTAACCGGCATGCTTGTCGTCACGCAATTTATAATGGCGCGTGTAATCTCACGCTCCCCATGAAAGATCTTTGGCTTGCGGTTTATATACTTGATGCTATTCTTGTTTTCTTCGTTATTCCTTTTGCTATGTTTTACTATGAAGGTGACCAAGATAAGAGTATTGGGAAAAGGGTTAAGAGTGCGCTGTGCTGGATGGTGACAACTGCTATTGTGTGTGCTCTTCTTTTGGGTATTTTGTATGGGCTTATCGGGAAGGTGGATTTTACTGTGAGGCATTTGTCTTCTTCCACAAGCTCATTTCCTGGCTCATGGCAGCAATTCAATAGTGGTCAAGAGTGTATTGGAACTGGCACCCGTCAGTGCTCTGCATACTCGGCTAGTCCTTCGTCAGAGAAAACTTGGACTATGCGCGCTACCTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCTCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGacttatattttcatttattcggcGTCCAAAGGCTGTTATCACTCGCTCACAATATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCAAAAGAACTAAAGAAAGCAGCTGAGTCACTTCATCAAGAAGAAAGAGCTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGTGAAATCGGTGGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAGGAGATGTATCCACAAGGGGAGCAGGCTGAGACAACATGGGCACTAACAGTTCTTGGATATCTGGCAAAATTTGTTTTAGGAATTTTAGGACTTATTGTTTCTGTGGCATGGATTGCTCATATCATTATCTACCTATTAATTAATCCTCCTCTTTCTCCTTTCCTGAATGAAGTTTTCATCAAGCTAGATGATATATGGGGTCTTCTGGGTACTGCCGCCTTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCATGATGCTTGGGCTAAGACTAGTTTTTGTTACTATACATCCCATGaaGTGGGGAGGGACTCTCATGAACTCTTTCCTGTTCAATGTTGGACTTATCCTTCTTTGCTCTATCAGTGTGATCCAGTTCTGTTCCACAGCATTTGCCTACTATGCTCAAGCAACAGCAGCACAGGAAATATTTGGCCACACTTTGGAGTCTCTTCGTGgaattaaatatttgtacaaGTACAATGTAtttcagattgcatttgttgtttTGGCTGGATTGACTTTTGTTTATTATACTGCTTTTGGATGGAGAAGAAAGAAGCCTAGTGGCAAGTTCCAGTTGTCTACATAA 1533 0.4077 MGDFNLALVIVAIVVCIIVFIFNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILMLPADVANRHACRHAIYNGACNLTLPMKDLWLAVYILDAILVFFVIPFAMFYYEGDQDKSIGKRVKSALCWMVTTAIVCALLLGILYGLIGKVDFTVRHLSSSTSSFPGSWQQFNSGQECIGTGTRQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERAGSKGRKFRKNVKSVEKELFQLEEDVKLLEEMYPQGEQAETTWALTVLGYLAKFVLGILGLIVSVAWIAHIIIYLLINPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFVTIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYTAFGWRRKKPSGKFQLST 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00421 510 PANTHER BNAC05G43630D PROTEIN 1 509 - -
Tsu06g00421 510 Coils Coil 250 277 - -
Tsu06g00421 510 Coils Coil 291 311 - -
Tsu06g00421 510 Pfam LMBR1-like membrane protein 9 488 IPR006876 -
Tsu06g00421 510 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00421 Tsu-Chr6 3597170 3604453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00421 K14617 - gmx:100800757 905.975