Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00374 ATGAAAGCCTTCACAAGTTTTAGTTCAAAACCTTTAGTTCATAAGCTAGGATCTTTGTCTCCTAGTATTGCTTCTCATGTTTCTGATAAACCCTTTTCTTGTTTCACTCTTCCCTTTAGAAATGACCAAAAAAGTTCCATTTTTTGTCTCTTGAAACTTGTCCAAAACAAGGGTCTTTACCCTTTTCATGCTGTGCCATCAGAAAACcagGATGTAGAGTTGGAAACTGCTGAGCCTCAAGTTCTACAGAGTGAAAGTGAGCAAACAAATGAATCGAAGTTCGTTCGTGTCGAATTTCAGCTACTAAAAGATTGTGACTTTGGGGAGCAGTTTTTAATAGTTGGAGATAATCCTATGCTTGGTTCATGGAACCCTTTAGATGCATTACCGTTGACATGGTCCGATGGCCATATATGGACTGCGGAGCTGGATATGCCGGCTGGTAAATCAATCCAATATAAGTTCATACTAAAAGGGAAAGAAGGCGATATTATTTGGCAGCCAGGGCCGGATCGAATTATTCAAACATGGGAAACTATGAACCGAATAATTGTTTGTGAGGATTGGGAGAATGCAGAACTTCAGAAAATTATAGAGGAAGATGAACTTTCTCAAACAAATGAAGAACCTCAGGTTCTATCAGAAGTGTCAACTTCAACTGAAATTTTGGATAATTCTCGAGACGAAATGGAATTCAGTGTATCCAATGTAGCCGGCATTGAAGATACACCAATTTACACAGAGGAGAAACTGATTGATGACAGTATTTCTTCTTCACCAATGCAAAAGCCGGTGGCTATTATTGCAGAAAATATAGGTTCCTCGGAGGATCACATAGAAAGCACACGTCACGAAGCGAATAAAAAGAATGTTGTTGGAGATAGTGAAGAATCAGAAGATGGTCCTCAAAATGATGGTAGAATAAATTATCTTGGATACAATGGAAATGCTGCGGGACTAAAGAATCGGGAAGGGACAATTGTGGAGGGAAGCTTAATCGATTTTGAAGGAGGTCCTGTTCTTGTACCTGGTTTAACACCACCGACTGAAGAAGAAGCTGCTACTAGTGAagttgttgaagaagaaaagctAGAGCCTTCAGTTGATGcgtttgaagaagaaaagaccGTGCTAGCGACTTCAGTTGAAGcgtttgaagaagaaaagaccGTGATAGAGCGTTCAATTGAAGCGTTTGAAACTCAGGATCAGAATATACCAGAGTTAAGTAAAGATCAAGAATCAGATAATGAATCTGATGATGGCACAGAACAAGAGACAAGTACAACAATCAATGGCGAGCTGAATTTCCACGAGGAGCAGTTTTATTCAGCACCATCAATAGAAGAAGGGTCAAATTCAGAGCCAATTCACGGTAATGCCTTGCGAAATGACATCGACTGGGGCCGCGAAACAGTAAAGAAGTTTCTAACAAAATTTGGATTGCTTTGA 1452 0.3815 MKAFTSFSSKPLVHKLGSLSPSIASHVSDKPFSCFTLPFRNDQKSSIFCLLKLVQNKGLYPFHAVPSENQDVELETAEPQVLQSESEQTNESKFVRVEFQLLKDCDFGEQFLIVGDNPMLGSWNPLDALPLTWSDGHIWTAELDMPAGKSIQYKFILKGKEGDIIWQPGPDRIIQTWETMNRIIVCEDWENAELQKIIEEDELSQTNEEPQVLSEVSTSTEILDNSRDEMEFSVSNVAGIEDTPIYTEEKLIDDSISSSPMQKPVAIIAENIGSSEDHIESTRHEANKKNVVGDSEESEDGPQNDGRINYLGYNGNAAGLKNREGTIVEGSLIDFEGGPVLVPGLTPPTEEEAATSEVVEEEKLEPSVDAFEEEKTVLATSVEAFEEEKTVIERSIEAFETQDQNIPELSKDQESDNESDDGTEQETSTTINGELNFHEEQFYSAPSIEEGSNSEPIHGNALRNDIDWGRETVKKFLTKFGLL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00374 483 Gene3D Immunoglobulins 91 190 IPR013783 -
Tsu06g00374 483 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 89 191 IPR002044 GO:2001070
Tsu06g00374 483 SUPERFAMILY Starch-binding domain-like 92 188 IPR013784 GO:0030246
Tsu06g00374 483 MobiDBLite consensus disorder prediction 275 307 - -
Tsu06g00374 483 MobiDBLite consensus disorder prediction 276 303 - -
Tsu06g00374 483 Pfam Starch binding domain 95 180 IPR002044 GO:2001070
Tsu06g00374 483 Coils Coil 368 402 - -
Tsu06g00374 483 MobiDBLite consensus disorder prediction 399 436 - -
Tsu06g00374 483 SMART CBM_20_2 94 186 IPR002044 GO:2001070
Tsu06g00374 483 PANTHER BLR6771 PROTEIN 1 373 - -
Tsu06g00374 483 CDD CBM20 96 189 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00374 - - mtr:MTR_4g015550 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00374 06 3178689 3182872 Tsu06g00374 06 3178689 3182872 ECH