Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00370 ATGGCACCGCCGAACATGGATCAGTTTGAAGAGTTTTTCAAAAGAGCAGATTTAGACTGTGATGGTAAAATCAGTTGGGATGAAGCTATCAATTTCTTTCAGGGATCCAACTTGCCCAAACACGTTCTTGCTAAGGTATGGACGCATGTTGATCAGGCTAAAACTGGTTTCCTTGCGCggaatgaattttttaatgCTTTGAGATTAGTAACTGTTGCACAGAGTAAGCGAGATTTAACTCCTGACGTTGTGAAGGAGGCTTTATTTGGTCGCGCTGCTGCTAGAATCCCTGCTCCGCAGATAAATAATCTTGCTACTATAGCTCCACAGCAATCCAACGAAAGCGATGGAAGTAACTCTTTCTCTTTGTCCGTGGACGAAATGGTGTTAAGTGGCAGTACAAATAGGGGCAAAATCGACCCATCAATGAATTTCGGTTTCAGTTTAAGTTCAAGTTCCTTACCTCCAAGAAGTGAAATTGAAGGCCATACAACAAGGGTGCTATCAGATCAACAAATTTTGCAAATTGAAGAAATTGACATTGAACTCAAGTCATTATGCCTTGAGGAAGTAGATGAACTATACAACCGACCAAAAAACGGAGCAATATATGACGAGGTTTCAGCCAATTGGATAACCATTAAGGAACGGTTAAAATTTCTATCAAGGAAAAATGAGAATCTCTCAATTGATGAGGCTATTGAAATTTATGATGCATCAGTTCTGTTGAAGCTTATGAGAAAACATGACGAATTTGAGAAGGCGGGGAAAATGGCTCATAGTGGTGTGCTCTTGATGCTTAAAGCCGAAACACTAAGAAAGAAAGGGCGCCGACTACTTGCCATGAGTAAAACCAAGTTGCAGATAGCAGACATTGAAGGTGTGTTTGATTAG 894 0.4004 MAPPNMDQFEEFFKRADLDCDGKISWDEAINFFQGSNLPKHVLAKVWTHVDQAKTGFLARNEFFNALRLVTVAQSKRDLTPDVVKEALFGRAAARIPAPQINNLATIAPQQSNESDGSNSFSLSVDEMVLSGSTNRGKIDPSMNFGFSLSSSSLPPRSEIEGHTTRVLSDQQILQIEEIDIELKSLCLEEVDELYNRPKNGAIYDEVSANWITIKERLKFLSRKNENLSIDEAIEIYDASVLLKLMRKHDEFEKAGKMAHSGVLLMLKAETLRKKGRRLLAMSKTKLQIADIEGVFD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00370 297 SMART eh_3 1 89 IPR000261 GO:0005515
Tsu06g00370 297 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Tsu06g00370 297 CDD EH 9 75 IPR000261 GO:0005515
Tsu06g00370 297 PANTHER EH DOMAIN 1 137 - -
Tsu06g00370 297 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 137 - -
Tsu06g00370 297 SUPERFAMILY EF-hand 3 85 IPR011992 -
Tsu06g00370 297 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Tsu06g00370 297 Gene3D - 4 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00370 Tsu-Chr6 3156483 3157710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00370 1 81 EF-hand Containing Proteins AT1G21630 33.333 5.44e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00370 K12472 - cam:101508239 178.718