Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00354 ATGAAACCCTTTTCGTTCACAAAagttcttctttttcttcttctactttGCACTTTTTCTTCATTCGTTTTCTCTGAGGATTCTAAGAAGAATGCTTTCCGGGAACGTGAAGCCTCCGATGATGCTCTTGGATACCCTGAAATAGATGAAGATGCTTTAGTGAATTCAAAATGTCCTTTGAATTTGGAGCTAAGATGGCAAACGGAAGTTAGTTCTAGTGTCTATGCAAATCCCTTGATTGCTGATATTAATAGTGATGGGAAGCTTGAGATAGTGGTTCCCTCTTTTGTTCACTACCTTGAAGTTCTAGAAGGAACCGATGGGGACAAAGTGCCAGGCTGGCCTGCTTTCCATCAATCAACTGTGCATTCCAGTCCTCTTCTATATGACATAGACAAAGATGGGGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGggTTTCCGGCTATATCATGTCAGATAAGCTTGAGGTCCCGCGTAGGAAAGTGCTTAAAAATTGGTATGTGGGTTTGAATCCTGATCCAGTGGACCGTTCCCATCCAGATGTTCACGATGACCAACTTATCCAAGAAGCTACTATTGCAAATTCTGTGTCCAAAATGGATGGAAGCAAACTTGAAGTTAATACCTCAGCTGCTACATCAACAGAAAGTCACCCTGACACAGAAAGTCACCCAAACACAGAAAGTCACCCTGACACAGAAAGTCACCCTAACACAGAAAGTCACCCTGACACACAAAGTCACCCTAACACAGAAAATCACCCTGACACACAAAGTCATCCTGACACAAAAAGCGTGTCCAATCCAGAACCCGAACACAAAATAAATGGAAGCCAATCAGAAGAGAATATTAAAGTGCCAACAATTGCTGATAATTCTTCTGTGGGTGCCGGTTCTGTGGAGACTGTTGATGCAGATAATAAAACCAGCACTGGGAGGCGTCTGCTGGAAGATAACAAAGGAGCTGAACAAGGTAGTTCTGAATCCAAAGGTAAGGAAGATGTTCATGCTGCAACTGTGGAAAATGATGAAGGCCTGGAAGCAGATGCTGATTCATCTTTTGAGTTATTCCGCAATAGTGATGAGCTGGCAGACGAGTACAGCTATGATTATGATGACTATGTTGATGAATCGCTGTGGGGTGATGAAGAATGGACTGAGGTGAAACATGAGAAACTAGAGGATTATGTGAATGTCGACTCACATATCTTGTGCACTCCTGTCATTGCAGATATTGACAATGATGGTGTATCGGAAATGGTTGTTGCTGTTTCTTATTTCTATGACCATGAGTATTATGACAACCAGGAGCATATGAAAGAACTGGGTGACATTGACATCGGGAAATATGTTGCCGGTGGTATTGTTGTTTTTAATCTGGATACAAAACAAGTTAAGTGGACTGTAGATCTTGATCTGAGTACAGAGACAACAAACTTCCGAGGGTACATGTATTCTTCTCCAACTGTTGCAGATTTGGATGGTGATGGGTATCTGGACATTCTTGTTGGAACTTCTTATGGCCTATTCTATGTGCTAGATCATCATGGTAAAATTAGAGAAAAGTTCCCTCTTGAAATGGCCGAGATTCAAGGAGGAGTTGTTGCAGCTGATGTCAATGATGATGGGAAAATTGAGCTAGTTACCGCTGATACACATGGAAATGTTGTTGTATGGACCCCAAAAGGAGATTTGATATGGGAGAAGCATCTGAAAAGTCTTATTCCACATGCTCCAACTATTGGCGATATCGACGGTGATGGCCATACTGAGCTTGTTGTGCCAACAATATCAGGGAAGATTCATGTTCTTGATGGAAGGGATGGATCATCTATTGGACGGTATCCATTTATAACTCATGGAAGAGTGATGAATCAAGTTCTTCTTGTTGATTTAAGtaaacaaaaggaaaagaagaagGGGTTGACTATTGTGACCACTTCGTTTGATGGTTATTTGTACCTCATTGATGGACCTACAGGCTGTGCTGATGTTGTTGACATTGGTGAAACTTCATATAGCATGGTCTTGGCAGACAATGTAGATGGTGGGGATGATATTGATCTGATTGTCTCAACAATGAATGGCAACGTCTTCTGCTTCTCAACTCCCTCTCCTCACCATCCCCTCAAGGCATGGAGATTGCCTAACCAAGGAAGAAACAATGTTGCAAATCGGTACGGTCGTGAAGGCATCTACATTACTCATCCTTCTAGGGCATTCCGTGATGAAGAAGGCAAGAGTTTTTGGGTGGAAATTGAGATTGTAGATAATTACAGATACCCATCTGGCAATCAAGGACCATACCATGTCACTACAACCTTGCTTGTCCCTGGTAATTACCAAGGAGATAGAACAATAAAGCAGAACCAGACCTATTCTCTACCTGGTAAACATCGAATTAAGCTGCCGACTGTGGGGGTAAGGACTTCAGGAACCGTTTTGGTTGAGATGGTCGACAAAAATGGACTATATTTCTCAGATGATTTCTCCCTTACATTCCATATGCACTACTATAAATTGTTGAAGTGGCTTCTTGTTCTTCCAATGCTTGGGATGTTTGGCGTCCTTGTCATCCTTCGTCCACAAGGCGCAGTGCCATTGCCATCATTCTCAAGGAACAATGATTAa 2652 0.4148 MKPFSFTKVLLFLLLLCTFSSFVFSEDSKKNAFREREASDDALGYPEIDEDALVNSKCPLNLELRWQTEVSSSVYANPLIADINSDGKLEIVVPSFVHYLEVLEGTDGDKVPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYIMSDKLEVPRRKVLKNWYVGLNPDPVDRSHPDVHDDQLIQEATIANSVSKMDGSKLEVNTSAATSTESHPDTESHPNTESHPDTESHPNTESHPDTQSHPNTENHPDTQSHPDTKSVSNPEPEHKINGSQSEENIKVPTIADNSSVGAGSVETVDADNKTSTGRRLLEDNKGAEQGSSESKGKEDVHAATVENDEGLEADADSSFELFRNSDELADEYSYDYDDYVDESLWGDEEWTEVKHEKLEDYVNVDSHILCTPVIADIDNDGVSEMVVAVSYFYDHEYYDNQEHMKELGDIDIGKYVAGGIVVFNLDTKQVKWTVDLDLSTETTNFRGYMYSSPTVADLDGDGYLDILVGTSYGLFYVLDHHGKIREKFPLEMAEIQGGVVAADVNDDGKIELVTADTHGNVVVWTPKGDLIWEKHLKSLIPHAPTIGDIDGDGHTELVVPTISGKIHVLDGRDGSSIGRYPFITHGRVMNQVLLVDLSKQKEKKKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDIDLIVSTMNGNVFCFSTPSPHHPLKAWRLPNQGRNNVANRYGREGIYITHPSRAFRDEEGKSFWVEIEIVDNYRYPSGNQGPYHVTTTLLVPGNYQGDRTIKQNQTYSLPGKHRIKLPTVGVRTSGTVLVEMVDKNGLYFSDDFSLTFHMHYYKLLKWLLVLPMLGMFGVLVILRPQGAVPLPSFSRNND 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00354 883 MobiDBLite consensus disorder prediction 249 313 - -
Tsu06g00354 883 MobiDBLite consensus disorder prediction 201 227 - -
Tsu06g00354 883 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 9 882 - -
Tsu06g00354 883 MobiDBLite consensus disorder prediction 228 248 - -
Tsu06g00354 883 PANTHER - 9 882 IPR045232 -
Tsu06g00354 883 Pfam FG-GAP repeat 493 515 IPR013517 -
Tsu06g00354 883 MobiDBLite consensus disorder prediction 201 342 - -
Tsu06g00354 883 MobiDBLite consensus disorder prediction 314 342 - -
Tsu06g00354 883 SUPERFAMILY Integrin alpha N-terminal domain 61 633 IPR028994 -
Tsu06g00354 883 Gene3D - 321 715 IPR015943 GO:0005515
Tsu06g00354 883 Pfam FG-GAP-like repeat 545 601 IPR013517 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00354 - - gmx:100500591 1480.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00354 06 2927052 2935894 Tsu06g00354 06 2927052 2935894 ECH