Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00348 ATGGCGCCCAATCTTCTCAACGGCTCAGAGGATAATCATATTCTTAAGCAGTTGAAAGATGGTACAGCAAAATTTGAGATTGTTTCTTCACCTGTTCCTTCCGTTGTTCCTCGCTTTAATCGGAATACAACCTTATCTGGAGCTGGAAATTGTATTAGCAGTCTCTTTTTCGCTAGAATTGGTTCATCATCACCTGGTGGACAGGCAATGAAGAAACTTGAACGTTTTTCAGTTCAGAAGGTTACAGGAGATGGACGGTGTCTGTTTCGTGCACTGGTCAAAGGAATGGCTTACAACAAGGGAGTAGCTCTTAACCAACGCGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCAGTCAAAGAAGCTATATGTGAAAATGTAGCAGAGCGTAAGTTATATGAAGAAGCCATCATTGCTGTCACGGTTGATGAGCCTTTACAACGTTACTGCAGACGGATTTCGCAACCTGATTTCTGGGGAGGAGAATCAGAACTATTGGTACTGTCAAAGTTATGTAAGCAGCCAATTATTGTGTACATACCAGAGCACGAGCATCGAGGCGGTGGTTGGGGATCTGGTTTCATTCCCATTGCAGAGTATGGAAGTGAGTTTATAAAGGGTTCTAGCAGAAAAGCTGTGAGGTTGCTATTCAGTGGTAAAAACCATTATGACCTTTTGTTATGA 687 0.4236 MAPNLLNGSEDNHILKQLKDGTAKFEIVSSPVPSVVPRFNRNTTLSGAGNCISSLFFARIGSSSPGGQAMKKLERFSVQKVTGDGRCLFRALVKGMAYNKGVALNQREERENADELRMAVKEAICENVAERKLYEEAIIAVTVDEPLQRYCRRISQPDFWGGESELLVLSKLCKQPIIVYIPEHEHRGGGWGSGFIPIAEYGSEFIKGSSRKAVRLLFSGKNHYDLLL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00348 228 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 10 227 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Tsu06g00348 228 SUPERFAMILY Cysteine proteinases 76 227 IPR038765 -
Tsu06g00348 228 Pfam OTU-like cysteine protease 82 184 IPR003323 -
Tsu06g00348 228 Gene3D - 60 228 - -
Tsu06g00348 228 Coils Coil 106 126 - -
Tsu06g00348 228 PANTHER OTU-LIKE CYSTEINE PROTEASE FAMILY PROTEIN, EXPRESSED 10 227 - -
Tsu06g00348 228 ProSiteProfiles OTU domain profile. 76 228 IPR003323 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00348 - - gmx:100807522 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00348 06 2866604 2869766 Tsu06g00348 06 2866604 2869766 ECH