Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00345 ATGGGTTCATCTCAACGATTATTCAACAGAGAAAGAACTCTTCATGAGATCCTTGGAGGTGGTCAAGTTGCAGATTTGATACTATGGAGGAACAAGAATCAAACTGTGATGATATTGTTGGTCACATTAGctacttttgttgtttttgagagATCTGGTTATACCCTTTTGTCTCTTGTTTCTAATGTTCTTCTGCTTCTTGttgttattctttttctttgggcCAAATCAGCAGCAATTCTCAATAGACCGGCTCCACCTCTACCACATTTGCACCTATCAGATGAAATGACAAATGAAATGGCATCTTTTATCCAAACCAGAGTTAATAATCTGTTTTCAGTTTCTCAAGATATTGCACTTGGTAAGGATTCAAGGCTGTTTCTGAAAGTAGCTGCATACCTCTTGTTAATTTCTGTTGTTGGTGGCTTCACTGATTTTCCTACCTTGGCATACACAAGTCTCTTTATTGTTCTTACTTTACCTGCACTCTATGAAAGATATGAAGATTACATTGATAGATTTGTTTTGAAGTGCTACAAGGAATTATGCCAAttgtatagaaaaataaatgaggAATATATTAGCAGAGTTCAATACTGGATTCTAGAGAAGAAAAAGTTGAGCTGA 630 0.3286 MGSSQRLFNRERTLHEILGGGQVADLILWRNKNQTVMILLVTLATFVVFERSGYTLLSLVSNVLLLLVVILFLWAKSAAILNRPAPPLPHLHLSDEMTNEMASFIQTRVNNLFSVSQDIALGKDSRLFLKVAAYLLLISVVGGFTDFPTLAYTSLFIVLTLPALYERYEDYIDRFVLKCYKELCQLYRKINEEYISRVQYWILEKKKLS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00345 209 ProSiteProfiles Reticulon domain profile. 23 209 IPR003388 -
Tsu06g00345 209 PANTHER RETICULON 5 208 IPR045064 GO:0009617
Tsu06g00345 209 PANTHER RETICULON-LIKE PROTEIN B12 5 208 - -
Tsu06g00345 209 Pfam Reticulon 23 177 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00345 Tsu-Chr6 2848513 2851654 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00345 K20723 - gmx:100809125 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00345 06 2848513 2851654 Tsu06g00345 06 2848513 2851654 ECH