Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00340 atgaaaatgccTTCTTTTCTTGATTCTTTACCTCCACGTTCATTCTTCTTTTGTTTCCTCCTTCTTCCACTATTGCTTTTGCTCTTACTCTTagtaccttcttcttcttcatcttcctcttcaaCTTCCTCTAATAATGTCAAGAAAGTAACTATGTCAATCTACTATGAAAGTCTATGTCCTTTTTGTGCTGATTTCATAGTGAATCATCTTGTGAAGATCTTCCAAACAAATCTCATTTCAATTGTGAATCTTAGATTGGTCCCTTGGGGAAATGCTTGGATTAAACCTGATGGCACTTTTGATTGCCAGCATGGAAACGATGAATGCGTTCTAAACACTGTCGAGGCCTGCGCCATTAAAATATATCCTGACGTGGCACAACATTTCAAATTTATACACTGCTTGGAGCGTCTCACTTTAGAAAATAGGCATAATGAATGGTTTAATTGCTTCCATATGACTGGCTTGTCCACATTGCCTATGGATTGCTACAAAAGTGGCAATGGAAAATCTATTGACCAAAAGTATGCTAAGGAAACTGCTCAGCTTAATCCTGCTCACAGATTTGTTCCATGGGTGGTTGTCAACAACCAAGCACTTCAAGAGGACTACCAAAATTTTGAGACATATATTTGCAAGGCATACAAGGGAATAATAGCATTAGTCCTTTTATTTTTCACCTATGAATCTAAGGGTGAATCTCACAAAACATCAATTGATCACCAGAAAGTTAATTTATCAGTATACTATGAAAGTCTAGACAAAGGAAGTGCAACTTTCATTGTTAAGAATCTTGATGAAATATTCAACAATGATATTATTAACATTGTTAATCTCCAATTAGTCCCTTGGGCCAATTCTCATGTTAATCAAGCCAACAATTCCATATCATGCCAgCATGGAGCAGATGAATGTGAGCTAAACTCTTTAGCAGCATGTGCCCTTAATATTTGGCCTAATGTGAATGAACattatggtttaatttactgcTATGAGTTTCTGGCAATTGATGGAAAGAACAAGATGTGGATGAACTGTACCAAAAAACTTGGTTTGCCTAAGAAGCCTCTTATGAATTGCTTTAATAAAGGAAATGGAACAGAGCTTGGAAAAAAACATATCTATGAGACAGCAAAACTAAACCCAACTCATTCATTTGTGCCATGGGTGGTGGTGAACAATAAACCTATTGGAAAAGACTATGCAAAATTTACATACTATGTTTGCAAGGCTTATAAAGGTGATGATATTCCAGCAGCTTGCAATGTTCATTTGAATgtgaaataa 1290 0.3426 MKMPSFLDSLPPRSFFFCFLLLPLLLLLLLLVPSSSSSSSSTSSNNVKKVTMSIYYESLCPFCADFIVNHLVKIFQTNLISIVNLRLVPWGNAWIKPDGTFDCQHGNDECVLNTVEACAIKIYPDVAQHFKFIHCLERLTLENRHNEWFNCFHMTGLSTLPMDCYKSGNGKSIDQKYAKETAQLNPAHRFVPWVVVNNQALQEDYQNFETYICKAYKGIIALVLLFFTYESKGESHKTSIDHQKVNLSVYYESLDKGSATFIVKNLDEIFNNDIINIVNLQLVPWANSHVNQANNSISCQHGADECELNSLAACALNIWPNVNEHYGLIYCYEFLAIDGKNKMWMNCTKKLGLPKKPLMNCFNKGNGTELGKKHIYETAKLNPTHSFVPWVVVNNKPIGKDYAKFTYYVCKAYKGDDIPAACNVHLNVK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00340 429 Coils Coil 428 429 - -
Tsu06g00340 429 PANTHER GAMMA INTERFERON RESPONSIVE LYSOSOMAL THIOL (GILT) REDUCTASE FAMILY PROTEIN 17 218 - -
Tsu06g00340 429 PANTHER GAMMA INTERFERON RESPONSIVE LYSOSOMAL THIOL (GILT) REDUCTASE FAMILY PROTEIN 226 424 - -
Tsu06g00340 429 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 17 218 IPR004911 GO:0016671
Tsu06g00340 429 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 226 424 IPR004911 GO:0016671
Tsu06g00340 429 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 247 350 IPR004911 GO:0016671
Tsu06g00340 429 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 52 153 IPR004911 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00340 Tsu-Chr6 2822706 2830160 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00340 K08059 - gmx:100800176 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00340 06 2822706 2830160 Tsu06g00340 06 2822706 2830160 ECH