Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00335 ATGGATCAAATATTCAACAAGGCTGGAACCTATTGGTTCAACCAGAAAGCCAATAATCAACTTAATTCCGTCGGTGATGATATCAATTCACTGTCAGAAAGTATCGAAGGGGGAACCAAATGGTTGGTCAACAAAATAAAAGGAAAGATGCAGAAGCCATTACCAGAGTTGCTAAAGGAGTATGATCTACCAATAGGAATCTTTCCTCGTGATGCAACAAACTACGAATTCAACGAAGAGACGGGAAAGCTTGTAGTCTTTGTTCCTCAAGTCTGTGAAGTAGGCTACAAAGATTCATCAGTCTTGCGTTTCTTCACCACCGTGACCGGTTATATGGAGAAAGGAAAGCTAGCAGACATAGAGGGAATGAAGACGAAAGTTATTATTTGGATGAAAGTGACAACCATTTTCTCCGAGGGATCGAAGCTCTACGTGACAGCTGGCATGAAGAAAACAAGGAGCAGGGAAGCATATGAGGTTACAAGAGATGGTGTAACTGTAGATAAGTTCTAA 513 0.4113 MDQIFNKAGTYWFNQKANNQLNSVGDDINSLSESIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIGIFPRDATNYEFNEETGKLVVFVPQVCEVGYKDSSVLRFFTTVTGYMEKGKLADIEGMKTKVIIWMKVTTIFSEGSKLYVTAGMKKTRSREAYEVTRDGVTVDKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00335 170 SUPERFAMILY At5g01610-like 2 170 IPR036758 -
Tsu06g00335 170 Gene3D - 32 170 IPR036758 -
Tsu06g00335 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Tsu06g00335 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Tsu06g00335 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00335 Tsu-Chr6 2790900 2793803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00335 - - gmx:100500143 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00335 06 2790900 2793803 Tsu06g00335 06 2790900 2793803 ECH
Tsu04g01439 04 14863650 14867017 Tsu06g00335 06 2790900 2793803 PCT