Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00333 ATGGCAATTAAGGGACACCAAATAGTAGTGCTAGGAAGCAATTTTGgaatcaaaatcacttttcattctcttgtAGCAATTTTAACAACTATTCTAGTTGTCACTGCCATATATTTTACACAAGAAGGAGGACAATGGTTTCTTCAAGAGACTAAATCTTCTGAATCATTGTTAAAATGCAACTTGTTTGATGGAAAGTGGGTTTATGACAATGAATCTTATCCACTCTACAAAGAACAACAATGTAAGTTCATGTCGGATCAATTGGCTTGTGAGAAATTTGGAAGGAAGGATCTTAACTACCAAAATTGGAGATGGAAGCCTCATCAATGTGACCTACCAAGGTTCAATGCCACAACATTGCTTGAAAGGCTAAGGAACAAGAGGCTTGTGTTTGTTGGGGATTCACTCAACAGAGGCCAATGGGTTTCAATGGTCTGCCTTGTTGAATCTTCACTTCCCTCAACTCTCAAATCCATGCAAACCATTGCCAATGGTTCACTCAACATTTTTAAGGCCAAAGAATACAATGCAACCATCGAGTTCTATTGGTCTCCATTACTTGTGGAATCAAATTCAGATGATCCTGTAAACCATAAGGTACCAGATAGGATTGTGAGAGTCCAAGCTATTGAGAAACATGCTAAGTATTGGACTCATGCAGACATTATAGTTTTCAACACTTACCTTTGGTGGAGAAGACAAGCAATGAATGTTTTGTGGGGGTCATTTGGAGACCCTAATGGAGTATACAAAAAGGTAAGAATGGTGAGAGTCTATGAGATGGCCTTGAGGACTTGGTCAGATTGGTTGGAAATGCATATTAATCGTAACAAGACccaattgttttttgtttctatgTCACCTACTCACCAAAGGGCTCATGAATGGGGAGGAGATAAgggtgaaaattgttacaaagaaaaaaatcaaataacagAAGAGGGATATAATGGAAATGGTTCTGTTCCTAAAATGATGCAAGTGGTTGAAAATGTTGTACAAGATTTGAAAACAAGAGGTTTAAATGTTGAAATGCTTAACATCACACAACTCTCAGAGTACAGAAAAGAAGGACACCCTTCTATCTATAGGAAGCAATGGGAGCCTTTAACAGAAGAGCAAATATCAAATCCAAAATCTTATGCAGATTGCATACATTGGTGCCTCCCTGTGTTCATAGCATTCTCAACTTTCCACAATGGAAGCACCATTGGACAAATCCACGAAAACCCAAATCACATTCACCATCAACAAGCTTCTTCAGATATCTTTGTTAAACCTAATCTCAAGACAAGTCAAGagGTTTTGGATAGACACTGTAGATGCAATTCTACTAGAGGATATAGTGGTCGGAGAATTGCTCGAGATGGTGGTTCGAAGAGTTATGGTCGCCGGAGAGTGAGTTCGGAGAAATGTGATGTTTTCTCAGGCAAATGGGTGTTTGATAATGCTTCATATCCATTGTATAATGAGTCAGATTGTCCTTATATGTCTGATCAATTGGCGTGTCACAAGCATGGAAGAAATGATTTGGGGTATCAACATTGGAGATGGCAACCTCATGATTGCAATTTAAAGAGGTGGAACGTGAAAGAAATGTGGGAAAAGTTGAGAGGTAAAAGGTTAATGTTTGTTGGAGATTCACTGAATAGAGGGCAATGGATATCTATGGTTTGCTTGTTACAGTCAGAAATTCCTGCTGATAAGAGATCAATGTCACCAAATGCTCATCTTACCATTTTTAGAGCAGAGGACTACAATGCAACTATTGAATTCCTCTGGGCTCCTCTTCTTGTTGAATCTAATTCCGACGATCCGGTGAATCACAGACTAGATGAACGGATAATTCGTCCGGATTCAGTTCTGAAGCATGCATCTCTTTGGGAGCATGCTGATATACTTGTTTTCAACACATACTTGTGGTGGAGACAAGGACCAGTTAAGCTATTATGGTCCGATGAAGAAAATGGAGCTTGTGAAGAATTAGAAGGGCAAGGAGCTATGGAGTTAGCCATGGGAGCCTGGGCCGATTGGGTGTCTTCTAAAGTTGATCCACTCAAGAAGCGTGTATTTTTTGTGACGATGTCCCCGACACATCTCTGGAGCCGAGAATGGAAGCCAGGAGGTGAAGGAAACTGTTACAGCGAGAAGGACCCTATTGATTTTGAGGGCTATTGGGGAAGTGGTTCCGATTTGCCTACAATGAGCACTGTGGAAAACATCCTAAGCAgtttaaattcaaaagtttCTGTCCTCAATGTTACTCAACTTTCTGAGTATCGAAAAGATGGACATCCTTCGATTTTTCGCAAATTCTGGGAGCCTCTTCGACCTGAACAATTGTCAAATCCTCCGTCTTACTCTGATTGCATACATTGGTGCTTGCCGGGGGTACCTGATACATGGAACGAGTTACTATTCCACTTATTATAA 2436 0.3892 MAIKGHQIVVLGSNFGIKITFHSLVAILTTILVVTAIYFTQEGGQWFLQETKSSESLLKCNLFDGKWVYDNESYPLYKEQQCKFMSDQLACEKFGRKDLNYQNWRWKPHQCDLPRFNATTLLERLRNKRLVFVGDSLNRGQWVSMVCLVESSLPSTLKSMQTIANGSLNIFKAKEYNATIEFYWSPLLVESNSDDPVNHKVPDRIVRVQAIEKHAKYWTHADIIVFNTYLWWRRQAMNVLWGSFGDPNGVYKKVRMVRVYEMALRTWSDWLEMHINRNKTQLFFVSMSPTHQRAHEWGGDKGENCYKEKNQITEEGYNGNGSVPKMMQVVENVVQDLKTRGLNVEMLNITQLSEYRKEGHPSIYRKQWEPLTEEQISNPKSYADCIHWCLPVFIAFSTFHNGSTIGQIHENPNHIHHQQASSDIFVKPNLKTSQEVLDRHCRCNSTRGYSGRRIARDGGSKSYGRRRVSSEKCDVFSGKWVFDNASYPLYNESDCPYMSDQLACHKHGRNDLGYQHWRWQPHDCNLKRWNVKEMWEKLRGKRLMFVGDSLNRGQWISMVCLLQSEIPADKRSMSPNAHLTIFRAEDYNATIEFLWAPLLVESNSDDPVNHRLDERIIRPDSVLKHASLWEHADILVFNTYLWWRQGPVKLLWSDEENGACEELEGQGAMELAMGAWADWVSSKVDPLKKRVFFVTMSPTHLWSREWKPGGEGNCYSEKDPIDFEGYWGSGSDLPTMSTVENILSSLNSKVSVLNVTQLSEYRKDGHPSIFRKFWEPLRPEQLSNPPSYSDCIHWCLPGVPDTWNELLFHLL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00333 811 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 35 447 811 - -
Tsu06g00333 811 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 35 43 391 - -
Tsu06g00333 811 Pfam PMR5 N terminal Domain 59 112 IPR025846 -
Tsu06g00333 811 Pfam PMR5 N terminal Domain 471 525 IPR025846 -
Tsu06g00333 811 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 528 809 IPR026057 GO:0016740
Tsu06g00333 811 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 113 392 IPR026057 GO:0016740
Tsu06g00333 811 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 447 811 IPR029962 GO:0016413
Tsu06g00333 811 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 43 391 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00333 Tsu-Chr6 2768008 2777216 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00333 - - gmx:100789158 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00333 06 2768008 2777216 Tsu06g00333 06 2768008 2777216 ECH