Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00330 ATGGACGACCCACCACCGTTACAAAAAATCGCAATCTCCGGTCCAACACTAGCCTCACTAATCCACCGCTTCTCAACCACCACCACCTCTTCCTCAATTGACGGCCTTCTCTTCGGTCACGTCACCTTCGTCACCCCTCTCAATCTCTCCGACGACTCCTCCGACACTTCCCAAACCCTCCTCGCCACCGTAACCGGTTTCCTCACCTCCTCTTCCTTCCATAACACCTCCGGCACAATCAACACCACCTCCCTCCGTCGTCTCATTCCTCATAACACCTCCCTCCTTGGTTGGTTCTCCGGTCGCCGTCGTACTCCTCTCCGTCCATCACTCCGTGAATTCACCATCActtcatctctttcatctctCTCCCAATTTTCTTCCACCATTAAACCTAATTCCGATTCCAATTCAAATTcgttctcttcttcttcatcttcttccctcaaTTTCAACCCTAGTTTGTTCTTTCTCCTCGCTTCACCAATTTCCGATCACACCTCTCACATTCATACTCATGATTACCGTGCTTACCAGTTCTTAAATGGGACCCAATCGTTCAACCCCGTTTCGATCGATATCATCAACATTGGTCCGGCTTTTCGGGGACATTATGGATCTTTTAGCCCTAATTCACCATTTCCTGCACTTGATTGTCAGCTGAGCTATTCTCCGATGATTCGCGATGACGATGATGAAAAGTTGAGTAAGATGAAGCAGGCTGCTAAAGATCAGAGGGATTTGGATATTTGTTCAGAGGGGTTTGAGGTTGGAAGGTTGAGTAAGTTGATGGGTTCTGAGGCTAAGAATTATACACAGAGTTTGGAGGATTTGTACCTTAAAATGCTTGTCAAGATTGAAAATCTGACTTCATTGGTTGAGGAGAGTTCAGCTAAGGTTCTTCAGCAGGAAAATCATAATAAGAagttgaaacaaaaaattttgAGATCTGCTGCCGCAGAATAA 966 0.4327 MDDPPPLQKIAISGPTLASLIHRFSTTTTSSSIDGLLFGHVTFVTPLNLSDDSSDTSQTLLATVTGFLTSSSFHNTSGTINTTSLRRLIPHNTSLLGWFSGRRRTPLRPSLREFTITSSLSSLSQFSSTIKPNSDSNSNSFSSSSSSSLNFNPSLFFLLASPISDHTSHIHTHDYRAYQFLNGTQSFNPVSIDIINIGPAFRGHYGSFSPNSPFPALDCQLSYSPMIRDDDDEKLSKMKQAAKDQRDLDICSEGFEVGRLSKLMGSEAKNYTQSLEDLYLKMLVKIENLTSLVEESSAKVLQQENHNKKLKQKILRSAAAE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00330 321 PRINTS Protein family FAM175 signature 97 113 IPR023238 -
Tsu06g00330 321 PRINTS Protein family FAM175 signature 12 30 IPR023238 -
Tsu06g00330 321 PRINTS Protein family FAM175 signature 72 91 IPR023238 -
Tsu06g00330 321 PANTHER ABRAXAS FAMILY MEMBER 1 315 IPR023238 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 199 219 IPR023241 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 276 302 IPR023241 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 227 247 IPR023241 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 253 273 IPR023241 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 2 23 IPR023241 -
Tsu06g00330 321 PRINTS Plant protein family FAM175 signature 162 182 IPR023241 -
Tsu06g00330 321 Coils Coil 293 313 - -
Tsu06g00330 321 PANTHER OS07G0540200 PROTEIN 1 315 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00330 K20799 - gmx:100819642 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00330 06 2707350 2711951 Tsu06g00330 06 2707350 2711951 ECH