Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00325 ATGCCGTGCCTCAACCTCTCCACCAACGTCAACCTCGAAGGTGTCGACACCTCTTCCATCTTATCTGAAGCCACTTCCACCGTCGCAACTATCATCGGAAAACCTGAAGCgTATGTGATGATTGTACTGAAAGGATCAGTACCCGTATCTTTTGGTGGGACTGAGCAACCAGCAGCTTATGGAGAACTGGTGTCTATTGGTGGTCTTGGACCTGATGTGAACAAGAAGCTTAGTGCTGCAATCGCTGCAATTCTCGAGACCAAGTTGTCTGTGCCCAAGAATCGATTCTTCTTGAAATTCTATGACACCAAGGCACATCAGAGTCAAGAATATGCACAGTGTTTGCATGCTTTACATCAGCAATAG 366 0.4645 MPCLNLSTNVNLEGVDTSSILSEATSTVATIIGKPEAYVMIVLKGSVPVSFGGTEQPAAYGELVSIGGLGPDVNKKLSAAIAAILETKLSVPKNRFFLKFYDTKAHQSQEYAQCLHALHQQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00325 121 Gene3D Macrophage Migration Inhibitory Factor 2 109 IPR014347 -
Tsu06g00325 121 PANTHER D-DOPACHROME DECARBOXYLASE 1 116 IPR001398 -
Tsu06g00325 121 PANTHER TAUTOMERASE/MIF SUPERFAMILY PROTEIN 1 116 - -
Tsu06g00325 121 SUPERFAMILY Tautomerase/MIF 1 106 IPR014347 -
Tsu06g00325 121 Pfam Macrophage migration inhibitory factor (MIF) 2 107 IPR001398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00325 Tsu-Chr6 2658143 2660542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00325 K07253 - csv:101215141 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00325 06 2658143 2660542 Tsu06g00325 06 2658143 2660542 ECH
Tsu04g01451 04 15018692 15022194 Tsu06g00325 06 2658143 2660542 PCT