Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00312 ATGAAGAAACAAAAGTTCATAGTAGAACAACAAAactcaaacaacaacaacactaaCCCATTTGAATCACTCTCAGAGGAACTCATTTTCACAATCCTAGACTTCCTCGaaccaaataaccaatcaaaacaaaccaaaaaatcaTTCTCTCTATGTTGCAAATGGTTTCACGCGCTTGAATCAAAACACCGACGCGCTCTCCGTCCTTTACGCGCCGAAAACATACCAACAATCCTCGCGCGTTATCCATCCATTAAAAACATCGATCTAACCTTATGTCCGCGCGTGAATGACACGTCCTTGTCTCTGATCGCCGGAGCGTATAAAAATACACTCAGGCGTATCGATTTATCGCGGTCGAGGTTTTTTACGGGGAATGGGATATTGAATATGgcagttaattgtgtgaatttGGTTGAACTTGATTTGTCGAACGCGACGGAGTTGAGAGATGCGGCTATGGTTGGTGTTGCACGCGCTGTTAATTTGGAGAAACTTTGGTTGAATAGGTGTAAGTTAGTTACGGATATGGGAATTGGTTGTATTGCTGTTGGTTGTAGGAAATTGAAGTTGATTAGTTTGAAATGGTGTGTTGGTGTTGCTGATTTAGGTGTTGATTTAATTGCTATTAAGTGTAAACAACTTTCTTCTATGGATCTCTCTTATTTGCCTATCACGGAGAAATGTCTCTCCTCGATCTTCAAATTGCAACATCTCGAAGATTTGGTCCTTGAAGGATGCTTTGGCGTCGGGGACGACAGCCTCAACAATTTAGTCGTCAACCAAGGATGCAAAACATTAAAGAAACTTGATATCTCAGGCTGTCAAAACATAAGTCATATCGGTCTATCAAAGCTAACAAGCATTTCTGGATGTGTCGAACAACTTGTATTAGCAGATGGTTCTCCGGTGACTATTGCTTTTGTTGATAGTTTGAGTAAACTTTCGATGTTGCAATCGATCACATTAGACGGCTGCATTATTACCTCTGATGGATTGAAAGCCATTGGAAATTTGTGCATTTCACTGAAGGAACTGAGTTTAAGCAAATGTTTGGGAGTGACAGATGAAGCTCTTTCTTTCCTCGTGTCAAAACACAGAGATTTAAGGAAGCTTGACATCACATGCTGCCGCAAAATAACTGATGTTTCAATTGCTAGCATTGCGAATTCATGCAGAAGTCTCACTTCTCTCAAAATGGAGTCGTGTACGCTAGTTTCATCAGAAGCGTATATATTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGATCTCACAGATAATGAAATTGACGATGAAGGCCTTGAGTCCATATCTCATTGTTCGAGGCTCTCCAGCCTGAAACTAGGGATCTGCCTGAACATAACTGATAGTGGAGTTGCCTATGTTGGCATGTGTTGCTCAAAGCTAAGGGAGCTCGATCTATACAGgTGCACAGGAGTAACAGATTTGGGAATCTCAGCAATTGCTTCTGGTTGCCCCGACCTAGAGATGATAAATACCGCATATTGCACTAGCATTACTGATAGGGCATTATTCTGCTTATCAAAATGTGCAAATTTGCAGACACTCGAAATTCGTGGTTGTCTTCTTGTTACATCTATAGGTTTGGCATCTATTTCAATGAATTGCAAACAACTAAGCCGCCTAGACATAAAAAAGTGTTACAATATTGATGATAGTGGTATGATTCCACTAGCTCATTTCTCCCAAAATTTACGACAGATAAACTTGTCGTATAGCTCAGTTACGGATGTAGGGCTTCTTTCACTTGCCGGTATCAGTTGCCTTCAAAACTTCACCCTACTTCACCTGCAGGGCTTGTCCCCACAAGGACTAGCGGCGGCGTTATTGGCATGTGGAGGGCTAACAAAAGCAAAGCTTCATGTTAAACTAAGATCACTTTTACCCGAACTGCTCATCAGACATATAGAAGCACGTGGCTGCGTGTTTGAATGGAGAGATAAAGTGTTTCAGGTATGTTCATCTCTCATTCCTATCAGGATTTAA 2013 0.3994 MKKQKFIVEQQNSNNNNTNPFESLSEELIFTILDFLEPNNQSKQTKKSFSLCCKWFHALESKHRRALRPLRAENIPTILARYPSIKNIDLTLCPRVNDTSLSLIAGAYKNTLRRIDLSRSRFFTGNGILNMAVNCVNLVELDLSNATELRDAAMVGVARAVNLEKLWLNRCKLVTDMGIGCIAVGCRKLKLISLKWCVGVADLGVDLIAIKCKQLSSMDLSYLPITEKCLSSIFKLQHLEDLVLEGCFGVGDDSLNNLVVNQGCKTLKKLDISGCQNISHIGLSKLTSISGCVEQLVLADGSPVTIAFVDSLSKLSMLQSITLDGCIITSDGLKAIGNLCISLKELSLSKCLGVTDEALSFLVSKHRDLRKLDITCCRKITDVSIASIANSCRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDLTDNEIDDEGLESISHCSRLSSLKLGICLNITDSGVAYVGMCCSKLRELDLYRCTGVTDLGISAIASGCPDLEMINTAYCTSITDRALFCLSKCANLQTLEIRGCLLVTSIGLASISMNCKQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLAGISCLQNFTLLHLQGLSPQGLAAALLACGGLTKAKLHVKLRSLLPELLIRHIEARGCVFEWRDKVFQVCSSLIPIRI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00312 670 SUPERFAMILY RNI-like 74 287 - -
Tsu06g00312 670 MobiDBLite consensus disorder prediction 1 20 - -
Tsu06g00312 670 Pfam Leucine Rich repeat 571 593 IPR001611 GO:0005515
Tsu06g00312 670 Pfam Leucine Rich repeat 264 286 IPR001611 GO:0005515
Tsu06g00312 670 Pfam Leucine Rich repeat 366 389 IPR001611 GO:0005515
Tsu06g00312 670 Pfam Leucine Rich repeat 468 491 IPR001611 GO:0005515
Tsu06g00312 670 Pfam Leucine Rich repeat 417 440 IPR001611 GO:0005515
Tsu06g00312 670 PANTHER UNCHARACTERIZED 13 620 - -
Tsu06g00312 670 SUPERFAMILY RNI-like 263 511 - -
Tsu06g00312 670 Gene3D Ribonuclease Inhibitor 418 659 IPR032675 -
Tsu06g00312 670 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 13 620 - -
Tsu06g00312 670 Gene3D Ribonuclease Inhibitor 262 417 IPR032675 -
Tsu06g00312 670 Gene3D Ribonuclease Inhibitor 68 155 IPR032675 -
Tsu06g00312 670 SMART LRR_CC_2 366 391 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 315 339 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 442 467 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 494 519 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 186 211 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 109 134 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 545 570 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 520 544 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 264 289 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 571 595 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 340 365 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 418 441 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 236 261 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 392 417 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 468 493 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 135 160 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 162 185 IPR006553 -
Tsu06g00312 670 SMART LRR_CC_2 82 107 IPR006553 -
Tsu06g00312 670 SUPERFAMILY RNI-like 468 609 - -
Tsu06g00312 670 Gene3D Ribonuclease Inhibitor 157 249 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00312 Tsu-Chr6 2541671 2546109 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00312 K10268 - gmx:100803617 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00312 06 2541671 2546109 Tsu06g00312 06 2541671 2546109 ECH