Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00310 ATGGatgaaaaagaaattttgagAGAGAGTGTGCTATCCCAAGAACCAcaatttccttcttcttcttcttcgtcttctCTTATCACTAATTTATACATTGCCCATTTTTTAGCTAGATGGGGTTCCAGaaTGTGGGAATTCTCTGTTGGTTTATATATGATCAGTATTTGGCCAGACTCATTGCTGTATGCAGCAATATATGGTGCTGTTGAATCTGCTTCCGTTGCATTGTTTGGTCCCATAATTGGAAAATGGGTTGATAAATTGACTTATCAAAAGGTTTTGAAATTGTGGTTGGTGACACAAAATCTCTCTTTTATTATTGCCGGTGCCACTGTAGTTACCTTACTTGTCTACTCATCTTTGAAGTATGCAAATTTTCCAGTTTTCTTATTACTTGTGGTGATAATCAACATCTGTGGTGGCATTGGAGTACTTTCAACTCTTGCCGGTACTATCCTGATAGAAAGAGAATGGTTGTTAGTTATATCGGAAGGTCAATCACCGGAACTGCTGACAAAGATGAATTCGGTTACGAGACGCATCGATCTAACCTGCAAGCTTCTTGCACCGGTTATGACTGGTTTCATAATAAGCTTTGTATCACTTAAAGCATCGGCTATAACTCTAGCACTTTGGAATAGTGTTTCTGTTTGGGTGGAGTATTGGCTTTTTACATATGTGTATAATGGAATTCCAGCTTTGTGTCAAAGTAGCCAAAGGAGAACGGAAAGGCTTTCATTACAAAGTGATCTAGAAAGGAACAATTCAACTTCTGAGGGAGATAGCCTGCTTAATGTTACAGATGGTGATAGCTCAGAATTGATAGATGGAAAAAGCAGGACAAAATTTTCTGAGTGGATTTCGAAAATCGCTTACGTTGATGCTTGGAGAGTTTACTTGCAGCAAGAAGTTGTCCTTCCTGGACTAGCTTTGGCTTTGCTTTTTTTCACTGTACTCAGCTTTGGAACTTTGATGACAGCCACCTTACAATGGGAAGGTATACCTGCATATGTTATTGGAATAGCACGAGGAATAAGCGCTGTAATTGGAATAGCTGCAACAGTTTTATATCCTGTGCTACAGCTTCATATATCAGCTATTAGAACTGGACTTTGGTCTATCTGGTCTCAGTGGACATGCCTACTCCCTTGTTTAGCTGCAATGTGGATCCAAAATGGCATTTTATCGTCATATATTTTGATGGGAAGTGTCTCAGTATCTCGGCTCGGACTGTGGATGTTTGACTTATCTAACCTTGTTCCCGAATCAGATCGTTTGATTGTTGGCGGTGTTCAGAATTCACTTCAGTCATTTATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACAGGAGTTTTGGAAGTTGAGTTTATTATCATTTCTGGCAGTCACATTAGCTGCATTCCTCTACTGCATCCATGTGTTCCGTGTACGGAAGCATATCTTTCACTTTGACAAACTATATAGTGTAATTTTTTCTACATGA 1500 0.38 MDEKEILRESVLSQEPQFPSSSSSSSLITNLYIAHFLARWGSRMWEFSVGLYMISIWPDSLLYAAIYGAVESASVALFGPIIGKWVDKLTYQKVLKLWLVTQNLSFIIAGATVVTLLVYSSLKYANFPVFLLLVVIINICGGIGVLSTLAGTILIEREWLLVISEGQSPELLTKMNSVTRRIDLTCKLLAPVMTGFIISFVSLKASAITLALWNSVSVWVEYWLFTYVYNGIPALCQSSQRRTERLSLQSDLERNNSTSEGDSLLNVTDGDSSELIDGKSRTKFSEWISKIAYVDAWRVYLQQEVVLPGLALALLFFTVLSFGTLMTATLQWEGIPAYVIGIARGISAVIGIAATVLYPVLQLHISAIRTGLWSIWSQWTCLLPCLAAMWIQNGILSSYILMGSVSVSRLGLWMFDLSNLVPESDRLIVGGVQNSLQSFMDLLAYVMGIIISDPQEFWKLSLLSFLAVTLAAFLYCIHVFRVRKHIFHFDKLYSVIFST 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00310 499 MobiDBLite consensus disorder prediction 1 24 - -
Tsu06g00310 499 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 8 492 IPR009716 GO:0005381|GO:0016021|GO:0034755
Tsu06g00310 499 SUPERFAMILY MFS general substrate transporter 30 485 IPR036259 -
Tsu06g00310 499 CDD MFS_SLC40A1_like 31 478 IPR009716 GO:0005381|GO:0016021|GO:0034755
Tsu06g00310 499 Pfam Ferroportin1 (FPN1) 27 468 IPR009716 GO:0005381|GO:0016021|GO:0034755
Tsu06g00310 499 Gene3D MFS general substrate transporter like domains 22 478 IPR036259 -
Tsu06g00310 499 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 8 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00310 Tsu-Chr6 2524640 2529385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00310 15 492 Organic Solute Cotransporters AT2G38460 56.879 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00310 K14685 - gmx:100802561 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00310 06 2524640 2529385 Tsu06g00310 06 2524640 2529385 ECH