Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00302 ATGCGAGGAAGACAACGAGTAGCATCAAGGGAATTCATAAGTGTTTATGATAGTAAAGATGAAAATCCAGCTTCACTGCGTGTACTGGGTCCCAGACCTTGTTGGCGGCGCTCTTTGCGGCATGTAATAGTGGCTTCTCTTTCCTCATTCTTATATGGCTACCATATTGGAGTAGTTAATGAAACCTTAGAGAGCATTTCTATAGATCTAGGCTTTAGCGGAAATACATTGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTCTATTCAGTGGGTGGATCGCAGATGGGGTTGGGCGTAGAAGAAGTTTCCAGTTGTGTGCTTTGCCTATGATCATTGGAGCAATAATGAGTGCAACATCAACATCCCTCTGGGGCATGCTTTTAGGAAGGTTATTTGTTGGTACTGGAATAGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTGCGCGGTACTTATGGAGGCTTAACGCAAATTGCAACATGTCTTGGACTCATGGGGGCTCTCTTTATAGGAATCCCAGCCAAAGAAATAGTTGGTTGGTGGCGGATTTGTTTCTGGGTATCTGTCATCCCTTCTACTGCACTTACTCTTTTCATGGAGATCTGTGCAGAGAGTCCTTATTGGCTTTTCAAGATAGGAAGAACCATTGAAGCTGAAGCTGAACTTGAGAAGCTGTTAGGAGGACTGCATGTGAAACCTGCAATGAGTGAACTTACGAAATCTGACAGAGGTGATGAGTCTAGCGGAATAAAAATCTCAGAATTATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCTACGCTTTTTGCCTTGCAGCAACTGTCCGGCATAAATGCtgttttctatttctcttcAACTGTCTTTGAAAGCTTTGGTGTATCATCTAAGTTGGGAAACACATGTGTAGGAATTTGCAATTTATTGGGTTCAATTATTTCAATGATTCTGCTGGATAAGCTTGGAAGGAAAGTGCTTCTCCTTGGTAGCTTTTTAGGCATggGAGTAACAATGGGTCTACAAGTCATAGCTGCAAGTCCTTATGCATCGGTATTTGGAGGGATGTATCTATCCGTGGGCGGCATGTTGCTGTATGTGCTATCATTTGCTCTTGGAGCTGGTCCGGTTCCTTGTCTCCTTATGTCCGAAATATTACCTGGCCAGATCAGAGCCAAGGCAATGGCAATATGCTTGGCTGTGCATTGGGTGATAAATTTCTTCGTCGGTCTATTATTTTTGCGCATGCTGGAACAACTGGGTCCACAACTCTTGTACAGTATTTTTGGTTCATTTTGTTTGTTGGCTGTgctttttgtgaagaaatatgtTCTGGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACAAGAAGCAACCtaa 1443 0.4241 MRGRQRVASREFISVYDSKDENPASLRVLGPRPCWRRSLRHVIVASLSSFLYGYHIGVVNETLESISIDLGFSGNTLAEGLVVSICLGGAFIGSLFSGWIADGVGRRRSFQLCALPMIIGAIMSATSTSLWGMLLGRLFVGTGIGLGPPVAALYVAEVSPPAVRGTYGGLTQIATCLGLMGALFIGIPAKEIVGWWRICFWVSVIPSTALTLFMEICAESPYWLFKIGRTIEAEAELEKLLGGLHVKPAMSELTKSDRGDESSGIKISELLFGCHARVMFIGSTLFALQQLSGINAVFYFSSTVFESFGVSSKLGNTCVGICNLLGSIISMILLDKLGRKVLLLGSFLGMGVTMGLQVIAASPYASVFGGMYLSVGGMLLYVLSFALGAGPVPCLLMSEILPGQIRAKAMAICLAVHWVINFFVGLLFLRMLEQLGPQLLYSIFGSFCLLAVLFVKKYVLETKGKSLQEIEIALLAQEAT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00302 480 CDD MFS_GLUT_like 44 461 - -
Tsu06g00302 480 PANTHER - 5 477 IPR045263 -
Tsu06g00302 480 ProSitePatterns Sugar transport proteins signature 1. 330 346 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu06g00302 480 Gene3D MFS general substrate transporter like domains 36 475 IPR036259 -
Tsu06g00302 480 ProSitePatterns Sugar transport proteins signature 1. 97 114 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu06g00302 480 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 463 IPR020846 GO:0022857
Tsu06g00302 480 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 5 477 - -
Tsu06g00302 480 PRINTS Sugar transporter signature 134 153 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu06g00302 480 PRINTS Sugar transporter signature 49 59 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu06g00302 480 PRINTS Sugar transporter signature 289 299 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu06g00302 480 PRINTS Sugar transporter signature 375 396 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu06g00302 480 PRINTS Sugar transporter signature 398 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu06g00302 480 SUPERFAMILY MFS general substrate transporter 27 471 IPR036259 -
Tsu06g00302 480 Pfam Sugar (and other) transporter 42 472 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu06g00302 480 TIGRFAM SP: MFS transporter, sugar porter (SP) family 36 470 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00302 Tsu-Chr6 2463401 2470362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00302 5 419 Organic Solute Cotransporters AT1G67300 65.403 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00302 - - aprc:113857086 803.127