Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00291 ATGAGTATGCCGAAACCTAATCAAGTAGCAGTTAGAGACCTTGTTGAAGAAGCTAAGAAACGAATTGTTATTCTCATCGTTTGCGTTGTTGGACTCTCCTATCTCATGTCATTGACAAGCTCCTCAGTTTGGGTCAACTTGCCTGCTGCAGCCTCCTTACTTATCATTTTCCGCTATTTATCACTGGATTATGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAATCAGGCTCCACCAGTATTCAGTCTTCAAAGAAGCCTACCGAAAATCCTAAAGCAGTTGCAAAGTTTGAGTGGCGAGCAAAAGTGAATTCTCCTGTTGTCGAGGATGCAATTGATCACTTCACCAGACATCTGATTTCTGAGTGGGTAACAGACCTTTGGTACTCTCGCTTAACACCAGACAAAGAGGGTCCCGAGGAGTTGGTGCAAATAGTTAACGGTGTTCTTGGTGAAATTTCAGGACGCATGAGAAATATAAATCTGATCGATTTTTTGATAAGGGATCTTGTTAATCTCATTTGCACTCACTTGGAGCTGTTTCGTGCTGCAATCTCAAAGATTGAAAAACAACACACAGATTCATTAACAATTGAAAGACGGGATACAGAGCTAAAAATTGTGTTGGCAGCAGAAGACAAATTGCATCCTGCTTTATTCTCTTCTGAAGCTGAGCACAAGGTTTTACAGCATCTGATGAATGGTCTTATGTCTGTCACTTTCAAGTCTGAGGATCTGCAGTGTTCTTTCTTTCGATATATTGTCAGGGAGCTTCTTGCATGTGCTGTAATGCGACCTGTCCTAAATTTAGCCAATCCAAGATTTATTAACGAAAGAATTGAATCTGTGGTAATTAATAAGACCAAGGCTAACAAGGGGGTTGATGCAGCTCAAGGGCTATCCCCCATTAAAGAAGATGAGTCACAAACTTCATCTGATCACTTTTCCAAGTGTTTAGATCCTTCTGCTACTGGTGTTGAGCTTACACAGCTAAAAAATGGTCAGTCCAGAAATCCAGAGCCATCTACAGAAAGAAATGTTTCTGATAACCTTTCTAGAGACCCGTTGCTTTCAATGGATACTCGATCTTCCCGTTCATGGAACTCTTTGCCTGGAAACTCACAAAGTAATGGTGACCAAGGTATTCAACGATATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCGTCTCTCGAAGAAAGACCCAAACTCTTGCACCAGAACATTTTGAGAATGTGTGGGCAAAGGGCAAAAATTACCAGAAAAAGGATGGAGAGAACCAGTCAAATGAGCGAGCCCCACAACATCCCCAAACAGGAAAATCACTCAAGGTAGATCATATGAAGGCAACATCTGGACCCAAAGAAAACGATACTAGATTGAAGCTTAATCCCTCTAAGGGAGGCCACATTAATTCTGGATACAGCAGTCAATTCACTGTTGAAAATGCATCTGTTCACGCAGACAAGAATGGATCAACTTGTTCTTCAGTTACCTCATATAAAGATGATGAGGACAGCCACATTAATAGGAATATGAGTGAATCAGAGAGCAATACTTCTTATACTTCTGAAGATGATGAAACCAGTACTGTTACTGGTCTTGATTCCCCTGTAACCAAGGTTTGGGATGGAAAAAGTATCAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATGTTGATAGCCACAGTACAAAGAAAAGGAATAAGAACCATTCCCGTTATCCGAGATCATTCAGAACACAATCTGGCAGTAAAAGGTCCCGGTCAACCGATTTAAAGACAAATATGTGGCAGGAAGTTGAGAGGTCAAGCTTTTTATCTGGTGATGGTCGAGACATACTTGGCTCTCCAAAACCACCTGTGAATTCTGACGGATCCTCTGATGATGCTGATTTTGAAAGTTTGGGTAGAATTTATAGCGGAGCAGCTGCCTCTTCATCCTCAATTTCTAAATCAGAATCTTGCAGTTTGGCTGTTAATCCCCTGAGAAGTTCTTCTGCTGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTGGGTGCAAATATTGTCAAGAGTGGTTCAAGAACGTTTGCCGTTTACTCCATATCTGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGgtttcgTCATTTTGAGGAGCTGCATCGGCGCCTGAAAGAGTTCTCTGAGTATAATCTTCATTTGCCACCTAAACATTTTCTGTCAACTGGTTTAGATGTAGCAACCATTCAAGAGCGGTGTGAATTGCttgataaatatttgaagAAACTTATGCAGCTGCCTACAGTTTCAGAATCAATTGAGTTATGGGACTTTCTGAGTGTTGACTCTCAGACATATGTATTCTCAAATTCTTTTTCTATCATGGAAACATTACCAGTTGGCCTGGATGCTAAGTCATCTGAGAAGACTAAAATCAGTTCCAATGTTTCTGCACCCGGAAGTGATCCTTTTTTGCAAACAAGAAATAATATCGTGGCTAATGGATCGAGGCCAACAGTAAATAGCACGCCTCTTTCTCTACCATCAAAAAAGAATACACGGGAATCAAGACAGTCATTTGACAATTCCGGAAGCAATGCAGATATTCTACCAAGGAAGAGTGCACATTCTCCCAATAACTTGCAGAAGTCAGTGAAAGGAAGAGATAGTTCAAACGAGGTCTCTGATGTGCAGCATGATACTGCTGAAACTCTTCCAACAGAGTGGGTGCCACCAAATTTAAGTGTACCCATATTGGATCTGGTTGATGTTATCTTCCAGCTGCAAGATGGTGGATGGATTAGGAGGCAGGCTTTCTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGCGATGCCTTAGATGATTGGTTGTTAGAGAAAATTCTGCTTCTCCGAAAGGGATCAGTGATTGCTTCAGGGGTCACACGAGTTGAGCAAATACTCTGGCCTGATGGAATTTTCTTAACCAAGCATCCAAATCGACGGCCACCTACCAGTCCATCTCAGAGTTCACCTAATGGCCATCAATCTACACCAGTATCTACTCCAAGGATGGATGATGAGCAGCAACAAGAGGCAGATCGGCGCGCAAAGTTTGTATATGAGCTAATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTCGGAAAGAAGGAGTATGAACAATGTGCAAGggatctttatttttttcttcagTCATCTGTTTGCTTGAAGCTGCTGGCTTTTGACCTCCTGGAGATGCTGCTTTTGTCGGCATTTCCAGAACTCGATGATGTATTCAAGCAGCTGCATGAAGAAAAGCATAAATTTGGTGAGCTCGTCAAGTAA 3345 0.4108 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLLIIFRYLSLDYEMKRKAAAYNNKSGSTSIQSSKKPTENPKAVAKFEWRAKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIVNGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRAAISKIEKQHTDSLTIERRDTELKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLMSVTFKSEDLQCSFFRYIVRELLACAVMRPVLNLANPRFINERIESVVINKTKANKGVDAAQGLSPIKEDESQTSSDHFSKCLDPSATGVELTQLKNGQSRNPEPSTERNVSDNLSRDPLLSMDTRSSRSWNSLPGNSQSNGDQGIQRYRSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPQTGKSLKVDHMKATSGPKENDTRLKLNPSKGGHINSGYSSQFTVENASVHADKNGSTCSSVTSYKDDEDSHINRNMSESESNTSYTSEDDETSTVTGLDSPVTKVWDGKSIRNQAVSYVHHPLENVDSHSTKKRNKNHSRYPRSFRTQSGSKRSRSTDLKTNMWQEVERSSFLSGDGRDILGSPKPPVNSDGSSDDADFESLGRIYSGAAASSSSISKSESCSLAVNPLRSSSAVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVATIQERCELLDKYLKKLMQLPTVSESIELWDFLSVDSQTYVFSNSFSIMETLPVGLDAKSSEKTKISSNVSAPGSDPFLQTRNNIVANGSRPTVNSTPLSLPSKKNTRESRQSFDNSGSNADILPRKSAHSPNNLQKSVKGRDSSNEVSDVQHDTAETLPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDALDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLTKHPNRRPPTSPSQSSPNGHQSTPVSTPRMDDEQQQEADRRAKFVYELMIDHAPPAIVGLVGKKEYEQCARDLYFFLQSSVCLKLLAFDLLEMLLLSAFPELDDVFKQLHEEKHKFGELVK 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00291 1114 SMART PX_2 682 786 IPR001683 GO:0035091
Tsu06g00291 1114 Gene3D - 678 794 IPR036871 GO:0035091
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 614 634 - -
Tsu06g00291 1114 PANTHER PX SERINE/THREONINE KINASE PXK 7 1112 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 810 901 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 561 600 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 450 465 - -
Tsu06g00291 1114 ProSiteProfiles PX domain profile. 678 790 IPR001683 GO:0035091
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 332 388 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 996 1029 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 421 475 - -
Tsu06g00291 1114 Pfam PXA domain 106 283 IPR003114 -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 332 384 - -
Tsu06g00291 1114 Pfam PX domain 709 786 IPR001683 GO:0035091
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 515 539 - -
Tsu06g00291 1114 Pfam Sorting nexin C terminal 937 1073 IPR013937 -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 581 600 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 297 320 - -
Tsu06g00291 1114 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 7 1112 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 491 541 - -
Tsu06g00291 1114 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Tsu06g00291 1114 SMART PXA_3 110 289 IPR003114 -
Tsu06g00291 1114 SUPERFAMILY PX domain 679 787 IPR036871 GO:0035091
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 811 892 - -
Tsu06g00291 1114 MobiDBLite consensus disorder prediction 999 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00291 Tsu-Chr6 2400108 2409680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00291 K17925 - gmx:100778731 1702.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00291 06 2400108 2409680 Tsu06g00291 06 2400108 2409680 ECH