Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00279 ATGAAATTATCAGATCCACAACCATGGACGGATGCATATAGAGGATCCTCACCCACCCTTGCTTGCCTGCTACCATTATCGTCTTCACCTAGCCATGCATCGACATTGCATCCCTTTACCCACCTCCTGCATCTCTCCGAGTCTCGTTTTTCTTTCCTATACAGtatatattaTGTGAAGTGTATAAAGACTCGATTAGGTACGAAAGAAAAGAGGAGAAGAGCTATTCAAAAGTTTACAAAGAGTGACATCGTTGAGCTTCTTAGGAGAGGACTTGATTATGATGCATATAAAAGGACTGAATGGTTTCTGTTCGaggaaaaaatattatcatgCTATGAATTCATTGAAAAGTTTATTGGATGCATATCGGATCATCTTGAAGACATAAATAAACAAAGTGATTGCCCTGAGGAATGCAAGGAAGCAATACCATCATTGATGTATGCTGCAGCAAGAATTTCTGATCTACCAGAATTGCGTGACCTCAGAACATTATTTACCGAAAAATATGGAAATTCTCTTGAACCATACATAAATAAAGAGTTTGTTGAGAGATTGAAAAGAGACCCTCCTACAAGAGAAATGAAGATTAAGTTATTATATGATATTGCACAAGAGTTCTCTATAGATTGGGATGCAAAGGCTTTGAAGTTAAGACTTTATACACATCCATCACTATATGAAGGGAGGCCTAAATCTGATGGAAGTGGAAGAGAACACAAAGATGAAAATGAGGCAAGGCGCCGAAACAATAGTGATGATGAAACAACGAGCACTGACACAGACACGgacacatcatcatcacattatCATGGAAGAAAAGGTAGTTCAAGTTCATTTGGAAGCATatctgaagatgatgatgaacaagtAAAAGAAATCAAGAAACCAAATTCCTTTTGGCACATTCCACCTCCTtatatcaaacaacaaaagactAATAACAAAGGTGGTGAAAGTAATGATAATTCAAACAAAACTACAGATTCTGAAGCAATACAGAAAAACATTGATTCAAGTGGAATGAAACCGACAATTTCAGtggaaacatcatcatcaacaacaaaagggaatgcACAAATGTGGGGTGGTGGATGGCGTATGCCTTCTACTTTACCTGATTATGATGATTTCATTGCTCGTTTTAAAGCTTTCACACGAAGATCATAG 1173 0.341 MKLSDPQPWTDAYRGSSPTLACLLPLSSSPSHASTLHPFTHLLHLSESRFSFLYSIYYVKCIKTRLGTKEKRRRAIQKFTKSDIVELLRRGLDYDAYKRTEWFLFEEKILSCYEFIEKFIGCISDHLEDINKQSDCPEECKEAIPSLMYAAARISDLPELRDLRTLFTEKYGNSLEPYINKEFVERLKRDPPTREMKIKLLYDIAQEFSIDWDAKALKLRLYTHPSLYEGRPKSDGSGREHKDENEARRRNNSDDETTSTDTDTDTSSSHYHGRKGSSSSFGSISEDDDEQVKEIKKPNSFWHIPPPYIKQQKTNNKGGESNDNSNKTTDSEAIQKNIDSSGMKPTISVETSSSTTKGNAQMWGGGWRMPSTLPDYDDFIARFKAFTRRS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00279 390 MobiDBLite consensus disorder prediction 262 285 - -
Tsu06g00279 390 PANTHER IST1 FAMILY MEMBER 57 388 IPR005061 GO:0015031
Tsu06g00279 390 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 57 388 - -
Tsu06g00279 390 MobiDBLite consensus disorder prediction 227 367 - -
Tsu06g00279 390 Pfam Regulator of Vps4 activity in the MVB pathway 59 211 IPR005061 GO:0015031
Tsu06g00279 390 Gene3D - 56 220 IPR042277 -
Tsu06g00279 390 MobiDBLite consensus disorder prediction 233 257 - -
Tsu06g00279 390 MobiDBLite consensus disorder prediction 309 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00279 Tsu-Chr6 2313459 2320582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00279 - - gmx:102665874 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00279 06 2313459 2320582 Tsu06g00279 06 2313459 2320582 ECH